Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0987 ATGAAACGAACTCGATCCCAAACCAAATCCAATTCCATTTCCAACAACAATCCACAACCCCAAATCAAAACCCTAAACTCTTCAAAAATCCCTTTCCCCGCCAAAAAAATCCCAAAACTCACCACCAAAAAACCAATTCTTCCACCTTCATCATCACCACCACCACCACCACCAATCGCAAAACCATTATCATCAACCGGAGAACTCGAAACCGCCCTCAACCACCTCCGTGCCGCCGATCCACTCCTCTCAACCATAATCAACACCTTCCCTTCTCCCCAATTCTCAAACAAAATCACGCCTTTCTTTTCTCTCATCAAAACCCTAATTTCCCAACAACTCTCAAACAAAGCTTCATCATCAATCGAAAACCGTTTCATTTCTCTCTTTGATTCACAATCTTCAATTCTCCCAAACGCGGTTCTATCCCTTACCCCAACTCAGCTTCGTGAAGTCGGAATCTCAGGACCAAAAGCAACCTACATTCATGATCTTTCGACGAAATACGCTAATGGGTTTTTATCGGATTCATCGATTATTGAGATGGATGATGAAATGTTGTATGAGAAATTAATGTCGGTTAAAGGAATTGGACCTTGGTCTGTTCATATGTTTATGATTTTTACACTTCATCGTCCTGATGTTTTGCCTGTTGGTGATCTTGTTGTGAGAAGAGGTGTGGAAAAATTGTATGGTCTTAAGGGTTTGCCTTCACCTTCACAAATGGAGGTTTTGTGTGAGAAATGGAAGCCTTATAGGTCTGTTGGGTCTTGGTATATGTATAGATTTGTTGAAGCTAAAGGGGTTTTGCCAAGTCATACTACTTAG 828 0.413 MKRTRSQTKSNSISNNNPQPQIKTLNSSKIPFPAKKIPKLTTKKPILPPSSSPPPPPPIAKPLSSTGELETALNHLRAADPLLSTIINTFPSPQFSNKITPFFSLIKTLISQQLSNKASSSIENRFISLFDSQSSILPNAVLSLTPTQLREVGISGPKATYIHDLSTKYANGFLSDSSIIEMDDEMLYEKLMSVKGIGPWSVHMFMIFTLHRPDVLPVGDLVVRRGVEKLYGLKGLPSPSQMEVLCEKWKPYRSVGSWYMYRFVEAKGVLPSHTT* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0987 275 SMART endo3end 110 265 IPR003265 GO:0006284
Tpr2g0987 275 PANTHER HHH-GPD BASE EXCISION DNA REPAIR FAMILY PROTEIN 1 272 - -
Tpr2g0987 275 MobiDBLite consensus disorder prediction 1 57 - -
Tpr2g0987 275 Gene3D Hypothetical protein; domain 2 99 212 - -
Tpr2g0987 275 Pfam HhH-GPD superfamily base excision DNA repair protein 106 250 IPR003265 GO:0006284
Tpr2g0987 275 Gene3D - 74 262 - -
Tpr2g0987 275 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE 1 272 - -
Tpr2g0987 275 MobiDBLite consensus disorder prediction 7 28 - -
Tpr2g0987 275 CDD ENDO3c 105 263 IPR003265 GO:0006284
Tpr2g0987 275 SUPERFAMILY DNA-glycosylase 95 263 IPR011257 GO:0003824|GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0987 Tpr-Chr2 11825098 11826594 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0987 K01247 - pvy:116113060 281.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0305 7 2469533 2474714 Tpr2g0987 2 11825098 11826594 ECH
Tpr2g0987 2 11825098 11826594 Tpr2g0987 2 11825098 11826594 ECH