Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0171 ATGCCACCTCAGCGGCGGCGGAACAACAACTTTTACCAACGCTTCCGTCTTATGATTCCGATTATTTCTGCCTTCGCCGCCGTTCTACTTTTTCTCTTCGTTCTGATTTCCTTTCTAGCTCCTTCTCCCAATGAATCCGACGATCATATCCACCGGAGACGCCAATACACCACGCAGGTTACCGTTGAAGAGAACGATGCCATTGAAAAACCTGTGTTCATCGTTCCGAAAGATGGAGGAAAACTCAGTCGCGATTTGTGGAGTTCTAGAAATTCGGAGCACTTTTTCGGTTGTAGCAATGCGAGCAGCAAGTTTCAAAAACCTGAAGTAATAACAAAACCTAATCGGTATTTGTTGATTGCAACTAGTGGAGGCTTGAATCAACAAAGAACTGGGATTACAGATGCTGTTGTTGTTGCGCGAATTTTGAATGCTACTCTGGTTGTTCCAAAATTGGATGAACGATCTTATTGGAAAGATTCTAGTAACTTTTCAGAGATATTTGATGTTGATTGGTTTATCTCGTATTTGTCAAATGATGTCAAAATTATCAAGCAACTCCCAAGTAGTAGTAAGGGAAGGAGAGCATTTTCTGCATACAGAATGCGTGTTCCAAGGAAATGTAGTGAAAAATGTTATATAAATCGTATATTGCCAGTACTCGTGAAAAAGCATGCTGTTCAACTCAACAAGTTTGACTACAGACTTGCAAACAGGTTGGATACTGAGTATCAGAAGTTGAGATGTAGAGTTAATTACCATGGTCTAAGATTTACTGATCCAATACAAGAAATGGGTGAAAAACTGGTCCAGCGGATGAGGATGAGAAAGAAGCATTACGTTACACTGCATTTGAGATTTGAACCTGATATGCTTGCATTTTCTGGATGTGACTATGGTGGAGGAGAGAAGGAGCAGAAGGAACTGAGCACAATAAGGAGGAGATGGAAGACACTGCATAAAAGCAATCCTGATAGGGCCAGGAGGCAGGGAAGATGCCCGTTAACCCCAGAAGAAGTTGGTCTAATGCTAAGAGCGTTGGGATATGGTTCTGATGTTCATATTTATGTTGCATCTGGGGAAGTATATGGAGGGGAAGAAACATTGGCACCTCTCAAAGCATTATTTCCTCATTACCATTCAAAAGAAACCATTGCTACCAAGGAAGAATTAGAACCGTTTTCTACGTTTTCTTCTCGCATGGCTGCACTTGATTTTATTGTTTGTGATGAAAGTGATGTGTTTGTCACCAATAACAATGGTAACATGGCTAAAATAATAGCCGGACGAAGGAGATACTTTGGGCACAAACCAACCATTCGTCCAAATGCTAAAAAACTCTACAGATTGTTCATGAACAGAGGTAATTTGACTTGGGATGTTTTTGCTTCTAGTGTTCGTAGGTACCAGAAAGGCTTCATTGGGGAGCCAAAGGAGGTTAGACCTGGTAGAGGTGGGTTTCATGAGAACCCATCTACCTGCATATGTGAAGATTCTGTGGCCAAAGCGGCCAAAAATTCTGACTCTAGAAAATTTTCAAAGGATGATGCAATCAAGAAAGATGTAGCTGACGAGGTGGATGTTGATGATAATGATAATGATAATGATGATGATATTGACAATGATAATGATGATGATGATGATGATCAGAATGATCTTACAGATAATGCTATGTTCAATGAAACAATGTCAGACTATGAAACTCTGAACTTTGAGGGTCCAGAGTTAGAGGAAATTATATCAGACTAG 1749 0.4042 MPPQRRRNNNFYQRFRLMIPIISAFAAVLLFLFVLISFLAPSPNESDDHIHRRRQYTTQVTVEENDAIEKPVFIVPKDGGKLSRDLWSSRNSEHFFGCSNASSKFQKPEVITKPNRYLLIATSGGLNQQRTGITDAVVVARILNATLVVPKLDERSYWKDSSNFSEIFDVDWFISYLSNDVKIIKQLPSSSKGRRAFSAYRMRVPRKCSEKCYINRILPVLVKKHAVQLNKFDYRLANRLDTEYQKLRCRVNYHGLRFTDPIQEMGEKLVQRMRMRKKHYVTLHLRFEPDMLAFSGCDYGGGEKEQKELSTIRRRWKTLHKSNPDRARRQGRCPLTPEEVGLMLRALGYGSDVHIYVASGEVYGGEETLAPLKALFPHYHSKETIATKEELEPFSTFSSRMAALDFIVCDESDVFVTNNNGNMAKIIAGRRRYFGHKPTIRPNAKKLYRLFMNRGNLTWDVFASSVRRYQKGFIGEPKEVRPGRGGFHENPSTCICEDSVAKAAKNSDSRKFSKDDAIKKDVADEVDVDDNDNDNDDDIDNDNDDDDDDQNDLTDNAMFNETMSDYETLNFEGPELEEIISD* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0171 582 MobiDBLite consensus disorder prediction 520 558 - -
Tpr7g0171 582 PANTHER O-FUCOSYLTRANSFERASE 16 7 582 - -
Tpr7g0171 582 PANTHER O-FUCOSYLTRANSFERASE 16 7 582 - -
Tpr7g0171 582 Pfam GDP-fucose protein O-fucosyltransferase 117 433 IPR019378 -
Tpr7g0171 582 CDD O-FucT_plant 117 439 IPR024709 -
Tpr7g0171 582 MobiDBLite consensus disorder prediction 527 554 - -
Tpr7g0171 582 Gene3D - 259 442 - -
Tpr7g0171 582 PIRSF UCP009360 2 504 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0171 Tpr-Chr7 1412385 1419063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0171 86 503 Miscellaneous Gene Families AT1G22460 42.955 1.76e-100 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0171 - - gmx:100817698 899.042
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0171 7 1412385 1419063 Tpr3g3140 3 34629904 34636500 ECH
Tpr7g0171 7 1412385 1419063 Tpr7g0171 7 1412385 1419063 ECH