Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3140 ATGCAGACACGAGTTTATGAGTATCGAAGAAGAAGAAACAATCGAAGCAATAGAATAGAGATGGCTAGATTTCATACCAGAAAACCATCTCTCAGTATCGTCACTTTCTACACCATTTTCATATTCGCTTTCTCCATTTCCATCTTCATCTTATACGTAAGAACCTTCAACGCCGATCAAGATCAACCACAACCTTACCAGGTGCCAAAACCACCTAGGTACGAATACAACGACCAACTTTGGGATTCGCCATACAGTCGTGGATTCCATCCTTGTGTCAACCCAACTGCTAAATATAAAGGTGTCCAACAATTTGATCGCTATCTGTCTGTTAGAAGTAACGGTGGACTCAATCAAATGCGAACTGGTATAGCAGACATGGTTGCTGTGGCACATATAATGAATGCAACTTTAGTCATCCCTCAATTGGACAGACGTTCATTCTGGCAAGATTCGAGTGTATTTTCAGACATATTCGATGAGTTTCATTTCATTGAATCCCTGAAAGGAGATATCAGGATTGTTCAGGAACTTCCCAAGACTTTGGAAGCTGCTCCCCGGGCTAGGAAACACTTTACTTCCTGGGCTGGCGTTGGTTACTATGAAGAGATGACGAGGTTATGGAATGACTATCAGGTGATACATGTTGCAAAATCAGATTCTCGACTTGCAAACAATGATCTTCCTCTAGACATCCAGAGGTTGAGATGCCGTGCAATGTATCATGCACTTCAATTTTCTCCTCCTATTGAGAATCTTGGAAAGAGGTTGGTGGATCGGCTGAGATCACGCGGGGGAAGATATATTGCTCTCCATCTCAGATATGAGAAAGATATGTTGTCTTTTACTGGTTGTGCTTATGGTCTGACAGATGCAGAATCTGAAGAGCTCAGAATTTTAAGGGAGACTACAAAGTATTGGAAAGTAAAAAAGATAAACTCAACAGAACAGAGAATTGGAGGATTTTGCCCACTCACTCCAAAGGAGGTTGGCATTTTTCTTCTAGCTCTTGGGTTTCCCCCATCAACACCAATATACATTGCTGCAGGGGAGATCTATGGTGGCAATACTCATCTATCAGAACTCTCTTCCCGCTTCCCTAATCTAATCTTTAAGGAATCCCTTGCAACTGCTGAAGAGCTGAAAGCTTTCACCAACCATGCATCTCAAAATGCTGCACTCGATTACATAATCTCTGTAGAGAGTGATGTATTCGTTCCATCGTACTCAGGAAATATGGCACGAGCTGTCGAGGGACACCGCAGGTTCTTAGGCCACCGTAAGACAATTACTCCAGACAGGAAAGGACTTGTTGGAATCTTTGATAAGCTGGAAACTGGAGAGCTAGTAGAAGGAGTGGCACTATCACATATGGTGCAGCGGATGCACAAGAACAGGCAAGGAGCTCCAAGGAAAAGACAAGGTTCATTACCTGGAGTTAAAGGCAGGGCACGTTTCAGGACTGAAGAGTCCTTTTACGAAAATCCATACCCAGAGTGTATATGTGGTTCGAGAAACAAACGAGAAAGAATGTGA 1536 0.429 MQTRVYEYRRRRNNRSNRIEMARFHTRKPSLSIVTFYTIFIFAFSISIFILYVRTFNADQDQPQPYQVPKPPRYEYNDQLWDSPYSRGFHPCVNPTAKYKGVQQFDRYLSVRSNGGLNQMRTGIADMVAVAHIMNATLVIPQLDRRSFWQDSSVFSDIFDEFHFIESLKGDIRIVQELPKTLEAAPRARKHFTSWAGVGYYEEMTRLWNDYQVIHVAKSDSRLANNDLPLDIQRLRCRAMYHALQFSPPIENLGKRLVDRLRSRGGRYIALHLRYEKDMLSFTGCAYGLTDAESEELRILRETTKYWKVKKINSTEQRIGGFCPLTPKEVGIFLLALGFPPSTPIYIAAGEIYGGNTHLSELSSRFPNLIFKESLATAEELKAFTNHASQNAALDYIISVESDVFVPSYSGNMARAVEGHRRFLGHRKTITPDRKGLVGIFDKLETGELVEGVALSHMVQRMHKNRQGAPRKRQGSLPGVKGRARFRTEESFYENPYPECICGSRNKRERM* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3140 511 CDD O-FucT_plant 108 429 IPR024709 -
Tpr3g3140 511 PANTHER O-FUCOSYLTRANSFERASE 38 14 506 - -
Tpr3g3140 511 Pfam GDP-fucose protein O-fucosyltransferase 108 423 IPR019378 -
Tpr3g3140 511 PIRSF UCP009360 2 506 IPR024709 -
Tpr3g3140 511 PANTHER OS02G0726500 PROTEIN-RELATED 14 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3140 Tpr-Chr3 34629904 34636500 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3140 78 502 Miscellaneous Gene Families AT1G22460 58.920 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3140 - - mtr:MTR_3g096020 896.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0171 7 1412385 1419063 Tpr3g3140 3 34629904 34636500 ECH
Tpr3g3140 3 34629904 34636500 Tpr3g3140 3 34629904 34636500 ECH