Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3555 ATGGAGCTTAGTAAAGTAACATTAGAAATATTCACAAAACTCGAACAACAATGGCTCTCACTCTCACCCTGCAAAACCACTTCCAAAACTCGCATACTCAGCATTGACGGCGGAGGAACCACCGCCATTGTCTCCGGTGCTGCCTTAATCCACCTTGAGGACCAGATCCGCTCACAAACCAACAATCCTCACGCTCAAATCACCGATTACTTCGACATCATAACCGGAACTGGCATTGGCGCAATACTCGCCGCGATGATCACCGCCGATGACGGTTTCGGCAGACCTCTGTACACAGCCAGAGATGCTGTCAACTTCATCACCGAAAGGAATCACGAATTTTATAAGGCGAAAACCGTCGGAGTTTTTCGCCGGCGTCGGAGATTCTCATCCACGAGCATTGAGAATTTGTTGAAGCGAGTTTTTCAAAGAAAAGAAAACAAAGGAAAATCGTTGACGTTAAAGGACACGTGTAAGCCTCTGCTTATTCCTTGCTTCGATCTAAAAAGCTCTGCGCCGTTCGTTTTCTCACGAGCCGACGCGTCCGAGTCCCCGAGTTTCAACTTCGAGCTATGGAAAGTCTGTCGCGCCACGTCATCAACTCCAAGCTTATTCAAACCGTTTCAATTCTCCTCCGTCGACGGAAAAACCTCTTGCTCAGCCGTAGACGGTGGTCTTGTGATGAACAATCCAGCCGCTGCAGCCGTCACGCATGTTCTCCATAACAAACGCGATTTCCCGGCGGTGAACAGCGTCGAGGATCTGATGGTTCTGTCCATCGGAAACGGAGCTCCGGCGAATAGAGTTCGTGATGTTCGTGAATGTTCGACGTCGACGGTTGTTGACATTGCTCTCGACGGCGTATCGGAAACCGTTGATCAGATGTTAGGAAACGCTTTCAGTTGGAACCGTACTGACTACGCCAGAATTCAGGCGTTTGGTTTAGGAGAAAAGGGAAGTTGGGAAGAAACGGAAGTGTTGAATGAGAGAGTGTTGGAGTCGTTACCGTTTGGTGGGAAACGGTTACTACAAGAAAGTAACGGTAACAGAATTGAGAGGTTTGTGCAACGTCTTGTTGCTACTGGAAAGTCTAGTTTACCACCTAGTCCTTGTAAGGTTACGCCGTTAGTTTCTTGCTAA 1140 0.4833 MELSKVTLEIFTKLEQQWLSLSPCKTTSKTRILSIDGGGTTAIVSGAALIHLEDQIRSQTNNPHAQITDYFDIITGTGIGAILAAMITADDGFGRPLYTARDAVNFITERNHEFYKAKTVGVFRRRRRFSSTSIENLLKRVFQRKENKGKSLTLKDTCKPLLIPCFDLKSSAPFVFSRADASESPSFNFELWKVCRATSSTPSLFKPFQFSSVDGKTSCSAVDGGLVMNNPAAAAVTHVLHNKRDFPAVNSVEDLMVLSIGNGAPANRVRDVRECSTSTVVDIALDGVSETVDQMLGNAFSWNRTDYARIQAFGLGEKGSWEETEVLNERVLESLPFGGKRLLQESNGNRIERFVQRLVATGKSSLPPSPCKVTPLVSC* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3555 379 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 33 236 IPR002641 GO:0006629
Tpr6g3555 379 PANTHER PATATIN 2 375 - -
Tpr6g3555 379 SUPERFAMILY FabD/lysophospholipase-like 29 315 IPR016035 -
Tpr6g3555 379 Pfam Patatin-like phospholipase 33 235 IPR002641 GO:0006629
Tpr6g3555 379 PANTHER PATATIN-LIKE PROTEIN 6 2 375 - -
Tpr6g3555 379 Gene3D Cytosolic phospholipase A2 catalytic domain 22 366 - -
Tpr6g3555 379 CDD Pat17_PNPLA8_PNPLA9_like 32 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3555 Tpr-Chr6 38587377 38588867 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3555 1 376 Acyl Lipid Metabolism Gene Families AT3G63200 67.792 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3555 - - gmx:100806989 589.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3555 6 38587377 38588867 Tpr6g3555 6 38587377 38588867 ECH
Tpr6g3555 6 38587377 38588867 Tpr1g2014 1 20612531 20614220 PCT