Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3541 ATGTTCCTTATGATGCTAAGGAACAGATCAAGAGCAGTGACCAAGCCAAATTTAATGGCTGATCATAGTTCTCAACAATCTTCAAATAATCAAAATTGTGCTAAAAAAACTCTCCCTTCTTTATTTGGTTCACCAAAATTTATTAAAGATTTCACCACCTTCAACAATAGTACTCTCTTAGAAGTTTTGAAAAGTCCAACTTCAATTCTTGACACTAGAATGTTATTCCCTTATGGAAATTCATTTTTGTATGATAACAAAATGAAAAATGTTCCAAACAAAACCTTCTCATCAAGAGCCAATATTGGTCTTGCTCTTATAGGTAACCTTAAAGATGATTCAATTGATGAGAATAATTATGTTGAACAAAACAAAGGAAATGTTTTGTTTGGAACACAACTTAGAGTTAAAATTCCATCTTTACCCTCTCCTATATTTTCTCCATTTGAGTCTCAAACTAAAACCAAAGACTCACCAAATTCAAGTGATTATACAAAAGATCAATCTCTATCTTTGAGTGAGATGGAACTTTGTGAGGAATATACATGTGTGATATCTCATGGTCCTAATCCAAGAACTACTCATATATTCAATAATTGCATTGTGGAGGAAAGTTATTGTTCTTTGCCACAAAACAACTCTAACTCTTCTTATGGGAATTTTCTTGGAATATGTCACACTTGCAAGAAACATCTTGAGCATACAAAGGACATTTTTATTTATGGAGGAGAGAAAGCCTTTTGCAGTAGAGAATGCAGGCACAGAGAAATGTTGTTAGATGGTGTAGAAAGTTTAGAAGAAATTGAAAGTACTAATTAA 819 0.3236 MFLMMLRNRSRAVTKPNLMADHSSQQSSNNQNCAKKTLPSLFGSPKFIKDFTTFNNSTLLEVLKSPTSILDTRMLFPYGNSFLYDNKMKNVPNKTFSSRANIGLALIGNLKDDSIDENNYVEQNKGNVLFGTQLRVKIPSLPSPIFSPFESQTKTKDSPNSSDYTKDQSLSLSEMELCEEYTCVISHGPNPRTTHIFNNCIVEESYCSLPQNNSNSSYGNFLGICHTCKKHLEHTKDIFIYGGEKAFCSRECRHREMLLDGVESLEEIESTN* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3541 272 PANTHER ZF-FLZ DOMAIN-CONTAINING PROTEIN-RELATED 5 263 - -
Tpr6g3541 272 PANTHER FCS-LIKE ZINC FINGER 8 5 263 IPR044593 -
Tpr6g3541 272 ProSiteProfiles Zinc finger FLZ-type profile. 220 264 IPR007650 -
Tpr6g3541 272 Pfam zinc-finger of the FCS-type, C2-C2 215 260 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3541 Tpr-Chr6 38361976 38364309 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3541 - - gmx:100800416 272.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3541 6 38361976 38364309 Tpr6g3541 6 38361976 38364309 ECH
Tpr6g3541 6 38361976 38364309 Tpr1g2026 1 20796963 20798373 PCT