Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2026 ATGCTACTTAGAAACAGATCAAGAGTAGTGACCAGACAAAGTTTGATGGGTGAACAATCACCAAATCAAAACTTGATCACTACAACTATTCCATCTCTATTTGGTTCACCAAACTATAGAGATTTTCATTTCACTTCTAAAAAATCTCTCTATGGAACTGAAGCTTTGATAAGTCCAACATCAATTCTTGACTCAAAAGCTTTAAGTCATTTTGAGAATCCTTTCTCAATTAACAATAGGAACAAAGTTTGTAGTAGCTCAAGAGACAAAGTAGATTCAAGAATCATTGGACTTGGTCTTGTTGGTGTTCTAAAAGATGAAACTTTTCATCAAAATTCTGAAAAACTAAGTAATAGAAAAGTTCTGTTTGGAACTGAACTTAGAGTGAAAATTCCTCCCTTGCCCACTTCCACGTTTGAGTCAAAAACTGATTTTTTTGGTAGCAAAATCAATGATTCACAAAATGGTGTTCTTAGTTTGAGACGTGAAATGGAACTTTCTGAAGAATACACATGTGTGAAATCACATGGTCCAAATCCAAAAACAACTCATATATTTGATAATTGTGTTGTGGAAAGTTACTGTTCTGTCCCTAATAGTCCTCACTATTTTTCACTGAATTTTCTTAGTTTTTGTCACACTTGCAAAAATCATCTTGAGCATACAAAAGACATCTTCATTTACAGAGGTGAAAAAGCTTTTTGCAGTCAAGAATGTCGACACAAAGAGATGGTGTTAGATGGAGCAGAAAATTAA 756 0.336 MLLRNRSRVVTRQSLMGEQSPNQNLITTTIPSLFGSPNYRDFHFTSKKSLYGTEALISPTSILDSKALSHFENPFSINNRNKVCSSSRDKVDSRIIGLGLVGVLKDETFHQNSEKLSNRKVLFGTELRVKIPPLPTSTFESKTDFFGSKINDSQNGVLSLRREMELSEEYTCVKSHGPNPKTTHIFDNCVVESYCSVPNSPHYFSLNFLSFCHTCKNHLEHTKDIFIYRGEKAFCSQECRHKEMVLDGAEN* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2026 251 ProSiteProfiles Zinc finger FLZ-type profile. 207 251 IPR007650 -
Tpr1g2026 251 PANTHER ZF-FLZ DOMAIN-CONTAINING PROTEIN-RELATED 2 251 - -
Tpr1g2026 251 PANTHER FCS-LIKE ZINC FINGER 8 2 251 IPR044593 -
Tpr1g2026 251 Pfam zinc-finger of the FCS-type, C2-C2 205 248 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2026 Tpr-Chr1 20796963 20798373 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2026 - - mtr:MTR_1g071780 383.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3541 6 38361976 38364309 Tpr1g2026 1 20796963 20798373 PCT