Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3528 ATGGCTACTCTGACCCATAGTGATTCTAATAAGAAGTATTCATGGTGGTGGGACAGTCACAATAGTCCCAAGAACTCAAAATGGCTCCAAGAAAACCTCACAGATATGGATGTCAAGGTGAAGCAAATGATCAAGCTTATCGAAGAAGACGCAGATTCCTTTGCCAGAAGAGCAGAAATGTATTACAAGAAGCGTCCAGAGCTTATGAAATTGGTTGAAGAGTTTTACCGGGCATACCGAGCACTGGCTGAGAGATATGATCATGCAAATGGAGTAATACGACAGGCACATCGTACCATGGCTGAAGCATTTCCTAATCAAGTCCCACCAGTACCAGCAGATGATTTACACACCGTTCCATCCATGGAGAATGAGCAGCCGCATACGCCATATAGTACTCGCCATTCACATGCATTTTCTGACTCCGATGAATTGCAAAAGGGTTTGAAACAGCTCAATGATCTCTTTATGACAGGAGAATCAGCAAGTCATGTAAATTTTGGAGAAGGGCGTGCTAGAAGGGGGCTCAATTTTCTTGACACAGAGGAGACTACAGGACTAAAAAATGTAAGCCATGATACTGAGAATCGTGTCTTATCTGATTCCGAGCGGATGACCAAAACGGAGACAGAAATTTTGGCATTAAAGATAGCCCTTGCTAGATTGGAAAGTGAAAAGGAAGATGGCTTGATTCAGTATCAACAGAGTCTGGAGAGATTATCTAATCTGGAATCAGAAATGTCTCGTGCAAGAGAGAATTCTCAAGGACTTGATGACCGAGCGAGCAAAGCTGAAGCTGAAGTTCAAACCTTGAAGGAAACCCTTGCTGAATTGCACGCTGAAAGAGAAAATAATATTCTTCAGTACCAGCAGTGCTTAGAGAAAATATGTGATCTGGAGAAAAATATTTCTTCTGCTCAAAAGGATATAGGAGAACTTAACGAACGAGCTACCGGAGCTGAAACTGAAGCCGAGTTCTTAAAGGCAGACCTTGTTAGCTTAGATGCTCAAAAGGAAGCTGTCCTTTTTCAGTACAACCAATCCTTGGAGACATTGTCAAAACTGGAGGAGGAATTAGTACAAGCCGAGGAGAATGCAAAGAAAACTAGCGAGCAAGCTAATATAGCTAAAAATGAAATTGAGGACATGAAGTTAAAAATTGTTAAACTTACCAAAGAGAATGAAGATGCGGCTCTTCGTTTTCAGCAATGTTTGGAGATAATTTCTAGTTTGGAGCATAAACTCTCTTGTGCTGAAGAGGAGGTGCGTGAGCTAAATTGCAAGATAAATGATGGGGCTGAAAAGTTAAATATTTCTGAACAAAAGTGTCTTCTCTTGGAAACATCAAATCAGACTCTAGAATCTGAATTGCAGTCTTTGGTACAGAAGATGGGGTCTCAAAGTGAAGAACTTAGCGAGAAGCAGAAGGAATTGGGTAGACTTTGGACTAGCATACAAGAGGAGAGGTTGCGATTCATTGAGGCCGAAACTGCTTTCCAAACTCTTCAGAATTTGCATGCTCAATCTCAGGAAGAACTTAGATCTCTTGCTTCCGAGCATCACAATAAGCTTGAAATTTTGGAGACAATGGAATCACATAAGCAAGCTTTAGAGGATGAAGTACACAAGGCCAAGGAGGAAAACAAAATTCTAAATGATCTCAAACTGTCTTCATCTGTGTCTATAAATAATTTGCAGAGTGAGATGTTAAACCTGAGGGAAACGATAAAGAAACTTGAACTGGAGGTTGGACTGCGAGTAGACGAAAGAAATGCTCTTCAGCAGGAAATTTACTGTCTTAAAGCGGAGCTTCATGATGTCAACAAAAGACACGAATCCACAATAGAGGAGGTCAGATCAACCGGCTTAGACCCACAATGCTTTTCCTTATCTGTGAAGACATTGCAAGATGAAAACTCAAAGCTGAAGGAAACATGCGAAGCTGACAAAGGTGAGAACACGGCTCTCAAGAAAAAACTGGAGATCATGGAGAAGCTTCTAGAGAAAAATGCTGCTTTGGAGAATTCACTTTCAGTTTTGAATGCTGAGCTGGAGAGTGTCAGAGGAAGGGTAAAGGTGTTGGAAGAAACTTGTGAATCCTTGCTTGAGGAGAAATCAACTCTTGCTGCTGAGAAGGCAACCTTGTTTTTTCAGTTGCAAACCACAGCTGAAAAGTTAGAGAAGATCTCAGAAAAAAACCTCCTTTTAGAAAATTCACTATTTGATGTGAATGCCGAGCTAGAAGCATTAAGGGTAAAGTCAAACATTTCTGAAGAGACTTGCCTTTTGCTTGGCCATGAAAAATCTAGTCTCACATCTGAGAATGAAACGTTAGATTCACAATTGAACATGACTCGTCAAACACTGAAAAATCTTGAGAAACAACATAGTGAATTGGAACTGCAACATTTGGAACTAAAAGCAGAAAAGGAGTCTGCACTTCAAAAGGTGGAAGATCTACTGGTTTCATTATACGCTGAGAGGGAAGAGCGTTCCAGAACTGTGCAATTGAATGACGGTCACTTGGTTGAGAAGGAATTTCAAATTCATATTCTACAAGAAGATGCAAGTTACCAGAAAAAGGAATACGAAGAGGAACTAGACAGAGCTGTACATGCTCAAATGCAAATTTTCATCTTGCAGAAATGTATTCGGGATATGGAGCAAAGTAACCTCTCCCTTCTAGTTGAGAGTCAGAGACTCTTGGAGGCATCCAAAACGTCTGATAGAGTGATGTCGAAATTGGAGAATGACAATGTTCAAAAGCAAGTTGATGCAAATTTGTTGTCTGAGAAAATTAACATACTAAGGATTGGGCTGCTTCAGGTGTTAAAAACTCTTGACATTAACAGCAACCATTTGTCTAAAGATAATGTTGAAGAAGACCAGGAGCTTCTGAACCATATACCTGACAAACTTCAAGAAACACAGAATTCTTTTGTCACAGTTTTTCATGAAAACCAGCAAGCAGCCATTGAGAATTCAGTTCTTGTTTCATTCCTTGACCAGTTGAAATTAAAGGCAGAAAATCTTGTAACAGAAAGAGAAGCTCTTGATATGGAATTGAGGACCATGTCTAATCAATACTTGGCACTGCAAGAAGAGGTCCGTATGATGGCAGAGAAGAATCAAGAATTGAAGTTGACAATCAGCAAGGGAGAAGAGAAAATGGAAGCAATGACAACTGAAAAATTGATGGCACTGAATGCGCTAAGCAAAGAAATGGATAAACTTGTTTCAGTAAATGTCGACCTTGAAGAGAGATTGAAAATAGTGATAGGAAAATTAGAAGATGTGCAGATGGAAAACATATATCTTAAGGAGTCATTTGTAGTGTCTAACACTGAACAAAAATTAATTGAATCTGTCAATGACCAATTAAATAGTCAGATTAGGAATGGAAAGGAATTGTTGTCTCAAAAGGAAAGCGAGATCCTGGGAGCAGCAGAGATGTATAGTGCTTTACAGGATGAGAAAAAAGCATTACAAAAATTGGTGGAAGATCTGAAGAGTAAGTATGAAGCGGCGAAGGTGATAATTGAAGACCGAGCTAGTCAAATTTTAGAATTATCATCAAACAATGATCATCAAAATGAGGAGCTTGGATGCCTTCATGAAGTGAATAAGAACTTGGAGGCAGAAATGAGGCACCTGCATCAAGAACTTGGAGAAACTAAACTGAGGGAGAAAAAGCTAAGTTTTGCATTACTCAAGGGAGCGGATGATCTTGAACAATGGGAATCTCAGGCTGCCACATTCTATACTGCAATGCAGATTTCTACTGTCAATGAGACATTCTTTGAAGGAAAGGTCCGTGAGCTAGCCGATGCATGTGAGAATCTTGAATACATAAACAGCTCCAAAGTTATGGAAAGTGAAAAGCTGGAAGAAAGAGTTAACAAGTTGGAAGCTGAAAACAGGAGATTACAGAGTCAGATGGCTTCTTATGTACCAGCCATCAGTGTTTTGAATGATTGTATTACATCCTTGGAGATGCAGACGCATGTTCATGCAAAACCTCATAGTCACGACTACAAAGAATCAAAGATTAAAAATTTGGCAAATGTCAAATACGCTGATGGTGATCCACGAAAAAGTGAAGACCGAAATGCTACAGAAACAGATGCACTTCCAGACTTCCAAGACATGCAGAAAAGGGTTAATGCAATTGAAATGGCTGTTAAACAGATGAATGAAAATTTCAAACCTAAGGATGAAATGAGAGAGATTCGAGTATTGAAATCTGGAATCAGCTGGCGCCAAGGAAACGCTCAAACAAGCAAGCATTATACTCAAATGGATGAAGTAAAGGAGCATCAATTTGGAGCTGTTTATGGACATAGGACAGGAAAATCATTGCAAGATGTTCCTGTGGCGGAAATTGAAGTTCTGCCAAAAGACATCATGCTTGATCATACACATGGGAGAAGTAGGAGAGGAGCTCGCGGGGGGTCCGATGATCAGATGCTTGAATTGTGGGAAACTGCTGATAAGGATGGCGTTATTGGCCTGAGAGTTGGCAAGGCACAGAAGGACGCTGCACCTACTGGGTACCACCAAAGGAGACATAGCAAGGATTCCAAAAATAAATATCCTTCGATAGATTCCTTGATCGAAAAGGAATTGAGTGTGGACAAATTAGAGATCTCAAGAAGACAGTCGCAAGACTCACAACCACTGCTGAATGAAGGGAATAAGAGGAAGGTTTTAGAAAGACTTGATTCAGATGCTCAAAAGTTGATGAACCTCGAAATCACCGTACAAGATTTGATAAACAAGATGGAAATTATTGAGAAGAACACAATGGGAAAAGGTATTGAGTATAATGCTGTGAAAGGGCAGCTTGAATCTGCTCAGGAAGCCATCACAAAGTTGTTTGATGCCAACCGCAAGTTGATGACGAATGTAGAAGAGGGCACACCATCCTTTTCTGGGAAGTCTGTAACAGTGTCAGATGAGAGTGGAAGTGTCAACAGAAGGAAAGTTTCAGAACAGGCTCGGAGAGGATCTGAAAAAATAGGACGGCTGCAGTTGGAGGTGCAAAGGCTGCAATTTTTACTTCTAAAATTGAATGATGACAAAGACGGAAAAGGAAAAGGAAAAGCAATGATTGATGATCAAAATCCAAGAGTCCTTTTACGAGATTATCTCTATGGTGAGACAAGGACAAGCTACCACAAGAGGAAGAAGAAAACATCCTTTTGTGGATGCATGCAGCCACCCACTAAGGGAGATTAA 5238 0.4023 MATLTHSDSNKKYSWWWDSHNSPKNSKWLQENLTDMDVKVKQMIKLIEEDADSFARRAEMYYKKRPELMKLVEEFYRAYRALAERYDHANGVIRQAHRTMAEAFPNQVPPVPADDLHTVPSMENEQPHTPYSTRHSHAFSDSDELQKGLKQLNDLFMTGESASHVNFGEGRARRGLNFLDTEETTGLKNVSHDTENRVLSDSERMTKTETEILALKIALARLESEKEDGLIQYQQSLERLSNLESEMSRARENSQGLDDRASKAEAEVQTLKETLAELHAERENNILQYQQCLEKICDLEKNISSAQKDIGELNERATGAETEAEFLKADLVSLDAQKEAVLFQYNQSLETLSKLEEELVQAEENAKKTSEQANIAKNEIEDMKLKIVKLTKENEDAALRFQQCLEIISSLEHKLSCAEEEVRELNCKINDGAEKLNISEQKCLLLETSNQTLESELQSLVQKMGSQSEELSEKQKELGRLWTSIQEERLRFIEAETAFQTLQNLHAQSQEELRSLASEHHNKLEILETMESHKQALEDEVHKAKEENKILNDLKLSSSVSINNLQSEMLNLRETIKKLELEVGLRVDERNALQQEIYCLKAELHDVNKRHESTIEEVRSTGLDPQCFSLSVKTLQDENSKLKETCEADKGENTALKKKLEIMEKLLEKNAALENSLSVLNAELESVRGRVKVLEETCESLLEEKSTLAAEKATLFFQLQTTAEKLEKISEKNLLLENSLFDVNAELEALRVKSNISEETCLLLGHEKSSLTSENETLDSQLNMTRQTLKNLEKQHSELELQHLELKAEKESALQKVEDLLVSLYAEREERSRTVQLNDGHLVEKEFQIHILQEDASYQKKEYEEELDRAVHAQMQIFILQKCIRDMEQSNLSLLVESQRLLEASKTSDRVMSKLENDNVQKQVDANLLSEKINILRIGLLQVLKTLDINSNHLSKDNVEEDQELLNHIPDKLQETQNSFVTVFHENQQAAIENSVLVSFLDQLKLKAENLVTEREALDMELRTMSNQYLALQEEVRMMAEKNQELKLTISKGEEKMEAMTTEKLMALNALSKEMDKLVSVNVDLEERLKIVIGKLEDVQMENIYLKESFVVSNTEQKLIESVNDQLNSQIRNGKELLSQKESEILGAAEMYSALQDEKKALQKLVEDLKSKYEAAKVIIEDRASQILELSSNNDHQNEELGCLHEVNKNLEAEMRHLHQELGETKLREKKLSFALLKGADDLEQWESQAATFYTAMQISTVNETFFEGKVRELADACENLEYINSSKVMESEKLEERVNKLEAENRRLQSQMASYVPAISVLNDCITSLEMQTHVHAKPHSHDYKESKIKNLANVKYADGDPRKSEDRNATETDALPDFQDMQKRVNAIEMAVKQMNENFKPKDEMREIRVLKSGISWRQGNAQTSKHYTQMDEVKEHQFGAVYGHRTGKSLQDVPVAEIEVLPKDIMLDHTHGRSRRGARGGSDDQMLELWETADKDGVIGLRVGKAQKDAAPTGYHQRRHSKDSKNKYPSIDSLIEKELSVDKLEISRRQSQDSQPLLNEGNKRKVLERLDSDAQKLMNLEITVQDLINKMEIIEKNTMGKGIEYNAVKGQLESAQEAITKLFDANRKLMTNVEEGTPSFSGKSVTVSDESGSVNRRKVSEQARRGSEKIGRLQLEVQRLQFLLLKLNDDKDGKGKGKAMIDDQNPRVLLRDYLYGETRTSYHKRKKKTSFCGCMQPPTKGD* 1746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3528 1745 Pfam KIP1-like protein 14 87 IPR011684 GO:0003779
Tpr6g3528 1745 MobiDBLite consensus disorder prediction 1515 1533 - -
Tpr6g3528 1745 Coils Coil 1068 1102 - -
Tpr6g3528 1745 PANTHER KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEIN 1062 1745 - -
Tpr6g3528 1745 PANTHER KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEIN 1 1063 - -
Tpr6g3528 1745 Coils Coil 1285 1312 - -
Tpr6g3528 1745 Coils Coil 562 582 - -
Tpr6g3528 1745 MobiDBLite consensus disorder prediction 1639 1668 - -
Tpr6g3528 1745 Coils Coil 1580 1600 - -
Tpr6g3528 1745 Coils Coil 408 435 - -
Tpr6g3528 1745 Coils Coil 1001 1063 - -
Tpr6g3528 1745 Coils Coil 345 400 - -
Tpr6g3528 1745 MobiDBLite consensus disorder prediction 1508 1533 - -
Tpr6g3528 1745 Coils Coil 775 816 - -
Tpr6g3528 1745 Coils Coil 527 554 - -
Tpr6g3528 1745 Coils Coil 632 652 - -
Tpr6g3528 1745 Coils Coil 1380 1400 - -
Tpr6g3528 1745 Gene3D - 203 377 - -
Tpr6g3528 1745 Coils Coil 450 477 - -
Tpr6g3528 1745 Coils Coil 590 610 - -
Tpr6g3528 1745 PANTHER PROTEIN NETWORKED 4A 1 1063 - -
Tpr6g3528 1745 PANTHER PROTEIN NETWORKED 4A 1062 1745 - -
Tpr6g3528 1745 Coils Coil 1152 1179 - -
Tpr6g3528 1745 Coils Coil 656 711 - -
Tpr6g3528 1745 Coils Coil 233 281 - -
Tpr6g3528 1745 MobiDBLite consensus disorder prediction 1639 1656 - -
Tpr6g3528 1745 Coils Coil 205 225 - -
Tpr6g3528 1745 Coils Coil 1124 1144 - -
Tpr6g3528 1745 Coils Coil 303 330 - -
Tpr6g3528 1745 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 13 93 IPR011684 GO:0003779
Tpr6g3528 1745 Coils Coil 499 519 - -
Tpr6g3528 1745 Coils Coil 1194 1228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3528 Tpr-Chr6 38254501 38261983 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3528 - - mtr:MTR_7g095410 2759.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3528 6 38254501 38261983 Tpr6g3528 6 38254501 38261983 ECH
Tpr6g3528 6 38254501 38261983 Tpr1g2036 1 20924622 20932733 PCT