Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2036 ATGGCAAATCGGTCTCACGCAGATTCTAGGAGAATGTATTCTTGGTGGTGGGATAGCCACATAAGTCCTAAGAACTCAAAATGGCTCCAAGAAAATCTTACAGATATGGATGTCAAGGTGAAGCAAATGATTAAGCTCATTGAAGAAGATGCAGATTCCTTTGCCAGGAGAGCAGAAATGTACTATAAAAAACGCCCAGAGCTTATGAAAATGGTTGAAGAGTTTTATAGGGCATACCGAGCATTGGCTGAGAGATATGATCATGCAACTGGAGTTATCCGCCATGCCCATCGGACCATGTCTGAAGCATTTCCTAATCAAAATCCTATGATGATCACAGATGATTTTTCTGCGGTTCCGCCCATGGAGACTGAGCCACGCACGCCAGAAACACATCACCCTTCGCATGCATTTGTTGACTCAGAGGATTCAGAAAAGGATTCTCATGTTATCAAAAGAAATGGAGCGCATGGTGAAGAGCCTAATTCTTCTTTGAACAAGACAGGTTTAAGACAGCTCAACGACCTCTTCATCCCTGGAGAGCATGCAAAGTTTGCAGATGGGCATGCTAGAAGGGGGCTCAATTTTTTAGAGACACAGGAGAGTGGCGAGCAAAACAATGGAAGCCATGGCACTAAAAATCAAGTCTTGTCTGAGTCTGAACGCGTGACAAAAGCTGAAGCAGAAATTTTGGCCTTGAAAAAAGCCCTTGCCAAATTAGAAGATGAAAAGGAAGCTGGCTTGCTTCAGTATCGGCAGAGTGTTGAGAAATTGTCTAATCTTGAATCAGAAGTATCTTCTGCACTAGAGAATTCTCAAAGACTCGATGAACGAGCAAGCAAAGCAGAAGCCGAAGTTCAAGATTTGAAGGACGCAGTAATCAAATTACAGGCTGAAAGGGAAGCTAGTCTTCTTCAGTACCAGGAATGCTTGGAGAAAATAACCGATCTGGAGAAAAATATTTCTTTTGCTCAGAAGGATGCAGGAGAATTTAATGAACGTGCTACTAGAGCTGAAACTGAAGTTGAGTCGTTGAAGCAGGACCTTGCTCGAGTAGAAGCTGAAAAGGAAGCTGCCCTTGTTGAATATAAACAGTGCTTGGAGACAATATCGAAACTGGAGGAGAGATTAAAAGAATCTGAGGAGAACGCTAGAAGGATTAATGAGCAAGCTAATATAGCTGAAAATGAAATCAAGGTTTTGAAGCTGGAAGTTACTAAACTTAATGAAGAGAAGGAAGACGCTGCTCTCCGGTATCAGCAATGCTTGGAGATAATTTCCAGTTTGGAACATAAACTCTCTTGTGCTGAAGAGGAGGTGCGTAGGTTAAATTCTAAGATAGAAGAAGAGGCTGAAAAGTTACATAGTTCTGAGGAGAAGTGTGTTCTTTTGGAAACATCAAATCACGCTCTACATTCTGAATTACAGTCTTTGGCACAAAAGATGGGGTCTCAAAGTGAAGAACTTAATGAGAAGCAGAAAGAATTGAGTAAACTTTGGAGTTGCATGCAAGAGGAGAGACTGCGATTCATTGAGGCTGAAACTGCTTTCCAAACTCTTCAGCATTTGCATTCTCAATCTCAGGAAGAGCTTAGATCTCTTGCTTCTGACTTTCACAGTAAAGTGGAAATACTCGGAAATGTGGAATCACGTAAGCAGGCTCTAGAGGATGAAGTGCACAGAGTGAATGAGGAAAACAAAATTCTAAATGAGCTCAAAATTTCTTCATCTTTGTCTATAAAAACTTTGCAGGATGAGATATTGAATTTGAAAGAGACAATAGAGAAACTTGAACAGGAGGTTGAGCTGCGACTTAATGAAAGAAACGCTCTTCAGCAAGAAATTTACTGTCTTAAAGAGGAGCTTAACGATATGAATAAAAAACACGATGCTATAATCGAGGAGGTCAGGTCAGCTGACTTAGACCCTCAGTGCTTTGGCGCATCTGTGAAAAATTTGCAAGAAGAGAACTCAAAGCTGAAGGAGACATGTGAGGCCGACAAAGATGAGAAAGCAGCTCTTTTGGTAAAATTGGAAATCATGGAGAAACTTTTGGAGAAAAATTCTGTTTTAGAGAATTCCATTTCAGACTTGAATGCTGAATTGAATAGCGTCAGAGGAAAGGTAAATGTGTTGGAAGAAACATGCCAGTCGCTGCTTGTGGAGAAATCAGCTCTTGCTGCCGAGAAGGCCACCTTGTTTTCTCAATTACAAGCCACAACTGAAAAGCTGGAGAAGCTCACAGAAAATAACAACCTTTTGGAAAACTCACTATTTGATGTCAACGCTGAACTTGATGGATTAAGAGGAAAGTCCAAGATCTTAGAAGACACATGCCAGTTACTTGAACATGAGAAGTCCGGTATCTTTTCGGAGAAAGAAGCCTTATTTACACAGTTGAACACAACACACCAAACACTGAAAGATCTTGAAAAACAACACAGTGAATTGGAATTAATGCATTCGGAGCTAAAAGGAGAAAGGGAGTCTGCACTTAAAAAGGTGGAAGAGCTATTGGTTTCCCTATATTCCCAAAGGGAAGAACATTGCAGAGTTGTGAAGTTGAATGAAGATGAACTGGCGAACAAGGAATTGCAAATTCATACTATGCAAGAAGATGCAAAGTACCGGAAAGAGGAATACAATGAGGAACTGGATAGAGCTATACATTCTCACATTGAAATTTTCATCTTGCAGAAGTTTATCCAAGATTTGGAGAAAAAGAACTTTTCCCTTCTAGTCGAGTGCCAGAGTCTTTTGGAAGCGTCCAAAATGTCCGACAGAATGATTTCTAAGTTGGAGACTGAAAATATTCAAAAGAAATATGATGTGGATTCTTTGTCTGAGAAAATTAAAATACTAAGGATTGGGCTGCTTCAGGTGTTGAAGACTCTTGACATTAACGGCAAAAATTTCTTCGAAGATATGCTTGATGAAGACCAAACTCTCCTGAACCATATACATGGAAAACTTAAGGAGAGACAAAAGTCTTTTGACACAATTTTCGATGAAAGACACAACTTGGCCGTTGAGAATTCAGTTCTGATTACATTTCTTGAGCAGTTGCAACTAAAGGTAGAAAATCTTGTGACAGAAAAAGGTGCGCTTGATGAGGAGTCCAGGATACAGTCAGAGAAGTTCACTGAATTGCAAATAGAGTTCCAAAACGTATTGGAAAATAATCAGGAGTTGAAGTTGACAATAAGCAAAGGAGAAGAGAGAATGGAAGGAATGACATCTGAAATAGAGAATCTATGCAAAGAGCTATCGGACTTTGAAAAGAGCCACAGAAGCTTAAAGGAAGAAAGTTGCACGATACTTGAAGAGAAAAACTCCTTGATGGGAAGATTTAAAGATCTGGGTGAGGAGAAGGGTAACTTGGAAGAAGAAATTTGTGTCCTGTTCCATGAGAGATTAGTTCAATCTAATATATCTGTGGTTTACGAGAATATTATCTTTGAAAAACTCCGGGAACTTAGACAGTTTGGTCAGGAACTTGGTAAGCTCTGTTCTGAAAATAATAACCTTGAGGCGAGATTGAAAACAATGGCACAGAAATTAGAAAATGCAGAAATGGAAAATTCACATCTTAAAGAGTTATTTGTAAAGTCAAATGTTGAATTGGATTTAGTTGAATCTGTCAATGATCAATTGACTTGTCAGATTAGTAATGAAAGGGAAATGTTGAATCAAAAGGAAAAAGTGCTTTTGGAAACAGCCAAGACGTTTCATGCTTTACACACTGAGAAAAAAGAATTGCAACGAACGGCGGAAGATCTGAAGGTTAGATATGAGGATGCCAAGGTGAAACTTGAAGAGCAAGCAAATCAAATTTTCAAATTGTCCTCAGACAAGGATCGTCAAAATGAAGAGCTTGGATGCCTTCACGAAGCGAACCAGAAACTGGAGTCTGAAATGAAGTGCCTACACCAAGAACTTGAAGAAACTAAACTGAAGGAAAAGAAGCTAAGTCACGAAGTGCATGAACGTATGAATGAGATTGAACAATGGGAAACTCAGGCTGCAGCACTCTATGCTGAACTGCAGATTTCTGTTGTCAATGAAACACTATTTGAAGGGAAGGCCAGTGAGCTAGCTGATACATGCGAGGATCTTGAGCACACAAACAAGTCGAAAGACATGGAAAGTGAACCGCTGAAAGAATTAGTTAGCAAGTTGCAAGGTGAAAACGGGAGACTCTATGATCAATTAGCTGCTTATGTCCCAGCTATTGGTGCTTTGAATGATTGTGTAACAACTCTGGAGATGCAGACTCTTGGACATGCAAAACATGAAAAACCGGAGGTTAAAAATTTGGTGAATCACCAATACACTGAAAATGGTCAACATACAGATGAAGATCATACTGTTACGGCATCAGATCCACTCCTTGACTTTCAAGACCTGCAGAGGAGGATCAATGAAATTTCAGTGGCAGTTAAGAATATAAACGGAAGTTTCAAACCAAAGGAGAATGAACAGAAGATGGGGAAGTCAAGGCCAGATAATCCTGTAAGTGAGATTGAAGTACTGCCAAAAGACATAATGCTTGATCAAATATCTGAATGTTCCTCATATGGAGTAAGTAGGGGAGGAACTCTTGAATCTGATGATCATATGCTTGAGTTATGGGAAACATCTGATAAGACACAGAAGATGGCGGCAGAACCGGTAGAAAATCGTCGTCAAAGAGGAGCAGCCAAGGAAACCAACAACAAACATCCTTCAGGAGATTACTTGGTGGAAAAGGAATTGAGCGTGGACAAGTTAGAGATCTCGAGAAGATTGTCACGGCCCCGTGAAGAAGGCAACAAGAGCAAGGTTTTGGAAAGACTTGATTCTGATTCACAGAAGTTAACAAACCTTCAAATAACGATACAAGACTTGATGAAGAAAGTGGAAAGCACTGAGAAGAGCACAAAGGGGAAAGGTTCCGAGTATGAAACGGTTAAAGGGCAGCTTGAAGCTTCTCAGGAGACCGTCACAAAGTTGTTTGATGCGAACCGCAAGTTGATGAAGAATGTAGAAGAGGGTGCATTGTCTTCATCTGGAACGGCTGAATCAACGTCAGATGAGATTGGAAATGTCAGCAGGAGGAGAGTTTCAGAACAGGCGCAGAGAGGATCTGAAAAAATAGGACAACTTCAGTTGGAGGTGCAAAGACTACAGTTTCTTCTTTTGAAACTCAATGAAAGCAAAGATAAAACAAGAACGGATGATCGAAGTCCGAGAGTACGTCTGCGGGATTATCTCTATGGTGCAACAAGAACCAACCACCAAAAGAAGAAGAAATCACCGTTTTGTGCGTGTGTAAGACCACCCACCAAGGGAGATTGA 5337 0.4034 MANRSHADSRRMYSWWWDSHISPKNSKWLQENLTDMDVKVKQMIKLIEEDADSFARRAEMYYKKRPELMKMVEEFYRAYRALAERYDHATGVIRHAHRTMSEAFPNQNPMMITDDFSAVPPMETEPRTPETHHPSHAFVDSEDSEKDSHVIKRNGAHGEEPNSSLNKTGLRQLNDLFIPGEHAKFADGHARRGLNFLETQESGEQNNGSHGTKNQVLSESERVTKAEAEILALKKALAKLEDEKEAGLLQYRQSVEKLSNLESEVSSALENSQRLDERASKAEAEVQDLKDAVIKLQAEREASLLQYQECLEKITDLEKNISFAQKDAGEFNERATRAETEVESLKQDLARVEAEKEAALVEYKQCLETISKLEERLKESEENARRINEQANIAENEIKVLKLEVTKLNEEKEDAALRYQQCLEIISSLEHKLSCAEEEVRRLNSKIEEEAEKLHSSEEKCVLLETSNHALHSELQSLAQKMGSQSEELNEKQKELSKLWSCMQEERLRFIEAETAFQTLQHLHSQSQEELRSLASDFHSKVEILGNVESRKQALEDEVHRVNEENKILNELKISSSLSIKTLQDEILNLKETIEKLEQEVELRLNERNALQQEIYCLKEELNDMNKKHDAIIEEVRSADLDPQCFGASVKNLQEENSKLKETCEADKDEKAALLVKLEIMEKLLEKNSVLENSISDLNAELNSVRGKVNVLEETCQSLLVEKSALAAEKATLFSQLQATTEKLEKLTENNNLLENSLFDVNAELDGLRGKSKILEDTCQLLEHEKSGIFSEKEALFTQLNTTHQTLKDLEKQHSELELMHSELKGERESALKKVEELLVSLYSQREEHCRVVKLNEDELANKELQIHTMQEDAKYRKEEYNEELDRAIHSHIEIFILQKFIQDLEKKNFSLLVECQSLLEASKMSDRMISKLETENIQKKYDVDSLSEKIKILRIGLLQVLKTLDINGKNFFEDMLDEDQTLLNHIHGKLKERQKSFDTIFDERHNLAVENSVLITFLEQLQLKVENLVTEKGALDEESRIQSEKFTELQIEFQNVLENNQELKLTISKGEERMEGMTSEIENLCKELSDFEKSHRSLKEESCTILEEKNSLMGRFKDLGEEKGNLEEEICVLFHERLVQSNISVVYENIIFEKLRELRQFGQELGKLCSENNNLEARLKTMAQKLENAEMENSHLKELFVKSNVELDLVESVNDQLTCQISNEREMLNQKEKVLLETAKTFHALHTEKKELQRTAEDLKVRYEDAKVKLEEQANQIFKLSSDKDRQNEELGCLHEANQKLESEMKCLHQELEETKLKEKKLSHEVHERMNEIEQWETQAAALYAELQISVVNETLFEGKASELADTCEDLEHTNKSKDMESEPLKELVSKLQGENGRLYDQLAAYVPAIGALNDCVTTLEMQTLGHAKHEKPEVKNLVNHQYTENGQHTDEDHTVTASDPLLDFQDLQRRINEISVAVKNINGSFKPKENEQKMGKSRPDNPVSEIEVLPKDIMLDQISECSSYGVSRGGTLESDDHMLELWETSDKTQKMAAEPVENRRQRGAAKETNNKHPSGDYLVEKELSVDKLEISRRLSRPREEGNKSKVLERLDSDSQKLTNLQITIQDLMKKVESTEKSTKGKGSEYETVKGQLEASQETVTKLFDANRKLMKNVEEGALSSSGTAESTSDEIGNVSRRRVSEQAQRGSEKIGQLQLEVQRLQFLLLKLNESKDKTRTDDRSPRVRLRDYLYGATRTNHQKKKKSPFCACVRPPTKGD* 1779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2036 1778 MobiDBLite consensus disorder prediction 121 167 - -
Tpr1g2036 1778 Coils Coil 251 299 - -
Tpr1g2036 1778 Coils Coil 1019 1039 - -
Tpr1g2036 1778 Coils Coil 1061 1102 - -
Tpr1g2036 1778 MobiDBLite consensus disorder prediction 1552 1581 - -
Tpr1g2036 1778 Pfam KIP1-like protein 14 87 IPR011684 GO:0003779
Tpr1g2036 1778 Coils Coil 1110 1130 - -
Tpr1g2036 1778 Coils Coil 1243 1326 - -
Tpr1g2036 1778 Coils Coil 223 243 - -
Tpr1g2036 1778 Coils Coil 730 764 - -
Tpr1g2036 1778 MobiDBLite consensus disorder prediction 1678 1699 - -
Tpr1g2036 1778 Coils Coil 545 572 - -
Tpr1g2036 1778 SUPERFAMILY Tropomyosin 389 637 - -
Tpr1g2036 1778 MobiDBLite consensus disorder prediction 199 220 - -
Tpr1g2036 1778 Coils Coil 1159 1200 - -
Tpr1g2036 1778 PANTHER PROTEIN NETWORKED 4A 1 1778 - -
Tpr1g2036 1778 Coils Coil 853 873 - -
Tpr1g2036 1778 Coils Coil 650 670 - -
Tpr1g2036 1778 MobiDBLite consensus disorder prediction 199 219 - -
Tpr1g2036 1778 Coils Coil 307 460 - -
Tpr1g2036 1778 MobiDBLite consensus disorder prediction 1678 1692 - -
Tpr1g2036 1778 MobiDBLite consensus disorder prediction 126 156 - -
Tpr1g2036 1778 MobiDBLite consensus disorder prediction 1549 1581 - -
Tpr1g2036 1778 Coils Coil 681 715 - -
Tpr1g2036 1778 Coils Coil 793 827 - -
Tpr1g2036 1778 PANTHER KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEIN 1 1778 - -
Tpr1g2036 1778 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 13 93 IPR011684 GO:0003779
Tpr1g2036 1778 Coils Coil 1612 1639 - -
Tpr1g2036 1778 Gene3D - 217 386 - -
Tpr1g2036 1778 Gene3D - 673 857 - -
Tpr1g2036 1778 Coils Coil 475 495 - -
Tpr1g2036 1778 Coils Coil 1215 1235 - -
Tpr1g2036 1778 Coils Coil 580 628 - -
Tpr1g2036 1778 SUPERFAMILY Tropomyosin 216 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2036 Tpr-Chr1 20924622 20932733 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2036 - - lang:109335385 2253.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3528 6 38254501 38261983 Tpr1g2036 1 20924622 20932733 PCT