Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3523 ATGGAACCAATCAATTGTCGGCATCCTGAATTGGCTCCGAGCGGAGGCACCCCTCTGCCGGAGAGTCCTCGAGTTCCTATGGAGTTTCTGTCAAGGTCATGGAGTGCCTCAGCTCTTGAAGTTACAAAAGCTCTTGCACCTCAACCACCTCTTTTTTCATGCATACCTTCCATTAATAGCCATACTACTTCTATTCCTGAAGAAAGCAGTTACCATTCTATCTCTGATGACCTCTCAACATTGTCTAAAAATCAGTTCTCTTTTGCTTCCTCTGCTACTTCACAGCTCGTCCTCGAGCGCATTATGTCACACTCTGCTAGAGAGGAAGTGTCACCGTTAACGTCAGGTAGATTATCTCACAGCAGCGAGCCTTTGAATGGCGGTGGTTCATTAACCGGAACAGACAGTCCACCGATTTCTCATTCAGATGAATTTGACGACGTTGTTAAGTTTTTTCGATCAAACAATTCAATTCACCCATTATTCAATGGTGGAAGAGCAAATGGGGCTATTGGAATTGGAAATGGTACTGCTTGTTCAGGACCTAAAACAGTTGGAAGGTGGTTGAAAGAAAGGAGAGAAAAGAAGAAAGAGGAAAGCAGAACACATAATGCTCAGCTGCACGCGACAATTACAGTGGCTGCTGTTGCTTCTGCTTTAGCAGCCATTGCGGCCGCTACAGCTGCCTCATCGACATCAAACAAGGACGAGAAGATGGCTAAGACAGACATGGCTGTTGCCTCGGCTGCCACATTAGTTGCTGCACAATGTGTTGAGGCTGCTGAAGCAATGGGAGCTGAGCGCGAGCACCTTGCTTCTGTGGTCAGCTCGGCTGTAAATGTCCGTTCACATGATGATATCACTACTCTTACTGCTGCAGCTGCCACAGCTCTTCGAGGAGCAGCAACATTAAAAGCAAGAGCTCTGAAGGAAGTATGGAATATTGCTGCTGTAACACCACTAGAGAAAGGAATGGGGGGTATGACAGTATGTGGAAAAGCTAATAACATAAACAACAGCACCAGTGACAGTGGAGAAATTGTGAATGGAGATAATTTTTCAGGTTCCGGCATCCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAACGCACTCGCAACGGTGATTTGCATTGGAAAATAGTTTCTGTTTACATACATAGAACAGGACAGGTAATGCTGAAAATGAAGAGCAAACTTGTTGCAGGAGCTATTACTACCAAAAAGAACAAGAATGTTGTGCTAGACGTGTGCACGGATTTACCGGCATGGCCAGGAAGAGATTTATTAGACGATGGAGACAAACGACGCTACTTTGGATTGAAAACAGATTTGAGGGGAATCGTGGAGTTTGAGTGTAGAAATCAAAGAGAATATGATATATGGACTCAAGGGGTCTCTAGGCTTCTCTCAATCGTTTCACAAAGAGAAAACAAGTGCAACAATTAA 1449 0.4465 MEPINCRHPELAPSGGTPLPESPRVPMEFLSRSWSASALEVTKALAPQPPLFSCIPSINSHTTSIPEESSYHSISDDLSTLSKNQFSFASSATSQLVLERIMSHSAREEVSPLTSGRLSHSSEPLNGGGSLTGTDSPPISHSDEFDDVVKFFRSNNSIHPLFNGGRANGAIGIGNGTACSGPKTVGRWLKERREKKKEESRTHNAQLHATITVAAVASALAAIAAATAASSTSNKDEKMAKTDMAVASAATLVAAQCVEAAEAMGAEREHLASVVSSAVNVRSHDDITTLTAAAATALRGAATLKARALKEVWNIAAVTPLEKGMGGMTVCGKANNINNSTSDSGEIVNGDNFSGSGIQELLAKGSELLKRTRNGDLHWKIVSVYIHRTGQVMLKMKSKLVAGAITTKKNKNVVLDVCTDLPAWPGRDLLDDGDKRRYFGLKTDLRGIVEFECRNQREYDIWTQGVSRLLSIVSQRENKCNN* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3523 482 Pfam Plant pleckstrin homology-like region 367 473 IPR013666 -
Tpr6g3523 482 MobiDBLite consensus disorder prediction 107 131 - -
Tpr6g3523 482 PANTHER AUXIN CANALIZATION PROTEIN 1 480 - -
Tpr6g3523 482 PANTHER EXPRESSED PROTEIN 1 480 IPR040269 -
Tpr6g3523 482 MobiDBLite consensus disorder prediction 1 22 - -
Tpr6g3523 482 MobiDBLite consensus disorder prediction 108 131 - -
Tpr6g3523 482 Pfam Auxin canalisation 20 324 IPR008546 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3523 Tpr-Chr6 38178442 38180957 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3523 - - mtr:MTR_7g095500 668.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3523 6 38178442 38180957 Tpr6g3523 6 38178442 38180957 ECH
Tpr6g3523 6 38178442 38180957 Tpr1g2043 1 20997811 21002545 PCT