Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2043 ATGGAACCTAAGTTAACAATAAATTGTCACAGAAATAATGAGTTTCATCTTCCAACAACAAACAATGGAAGTAGTACTCGTTTGCCAGAGAGTCCAAGAATACCAATGGAGTTTCTTTCAAGGTCATGGAGTGCTTCTGCATTTGAGGTCTCTAAAGCCTTGTCACCTCAACCACCACTACCTCCTCCTCCTTCTTCTTCTTCTTCTTACTTACCTTCCAATAATAAGACTTCTTCTACTAACTCTATTCCTGAAGAAACTATTACTACTCTCTCTCAAGAATTCTCAACCATGTGTGCAAATCAATTCTCTTTTGTTTCCTCTGCTACTTCACAACTTGTCCTTGAACGTATCATGTCACAGTCCACAAGAGAGGAAGTATCTCCATTAACATCAGGTAGATTGTCTCATAGCAGTGAACCATTGAATGGTGGTGGTTCTTTAACAGGAACTGATAGTCCACCAATTTCTCCTTCTGATGAGTTTGATGATGTTGTTAAGTTTTTTCGAGCAAACAATTCCATACACCCTTTATTTAATGGTACAAGAGCCATGAGCACTGGAATTGGCAATGCAACACCTTGTTCAGGACCTAAAACAGTAGGAAGATGGTTGAAAGAAAGAAGAGAAAAAAAGAAAGAAGAAAACAGAAGCCATAATGCTCAAGTTCATGCTGCTATTTCTGTAGCGGCGGTTGCTTCCGCAGTTGCAGCCATCACTGCAGCAACAGCAGCATCATCTGCACCAAACAAGGATGAGAAGATGGCTAAGACTGATATGGCTGTAGCTTCTGCAGCAACACTAATTGCTGCTCAGTGTGTTGAAGCTGCTGAAGCAATGGGAGCTGAGAGAGAACACCTTGCTTCTGTTGTTAGTTCTGCTGTTAATGTTCGGTCGCACGATGATATTACAACTCTAACTGCTGCAGCTGCAACAGCTCTAAGAGGAGCAGCAACATTGAAAGCAAGAGCATTGAAAGAGATGTGGAATATTAATGCAGTGACACCACTAGAGAAAAGCAAAGGAATTGGAATATGTGGTGGTAAAGCCAATAATAACAGTAGTTCTAGCACTAGTGATAGTGGTGGAGAAGTTATCAATGCAGATAATTTTCTAAGTGCTTGTAGCCAAGAGCTTCTTGCTAGAGGAACTGAATTACTCAAACGCACTCGCAAAGGTGATCTTCATTGGAAAATTGTTTCTGTTTATATACATCGAACCGGCCAGGTGATGCTGAAAATGAAAAGTAGACATGTTGCAGGAACAATAACAAAAAAGAAAAAGAATGTTGTGTTTGATGTGTGCGCGAATTTACCGGCATGGCCAGGAAGGCATCTATTGGAGGATGGTGAAAAAAGAAGGTATTTTGGATTGAAGACAGAATCAAGAGGTTTAGTTGAGTTTGAATGTAGAAATCAAAGAGAATATGATTTATGGACTCAAGGGGTTTCAAGGCTTCTCTCCATTGTTTCGCAGAGAAAAAACAGAAATGGAATCTAG 1500 0.402 MEPKLTINCHRNNEFHLPTTNNGSSTRLPESPRIPMEFLSRSWSASAFEVSKALSPQPPLPPPPSSSSSYLPSNNKTSSTNSIPEETITTLSQEFSTMCANQFSFVSSATSQLVLERIMSQSTREEVSPLTSGRLSHSSEPLNGGGSLTGTDSPPISPSDEFDDVVKFFRANNSIHPLFNGTRAMSTGIGNATPCSGPKTVGRWLKERREKKKEENRSHNAQVHAAISVAAVASAVAAITAATAASSAPNKDEKMAKTDMAVASAATLIAAQCVEAAEAMGAEREHLASVVSSAVNVRSHDDITTLTAAAATALRGAATLKARALKEMWNINAVTPLEKSKGIGICGGKANNNSSSSTSDSGGEVINADNFLSACSQELLARGTELLKRTRKGDLHWKIVSVYIHRTGQVMLKMKSRHVAGTITKKKKNVVFDVCANLPAWPGRHLLEDGEKRRYFGLKTESRGLVEFECRNQREYDLWTQGVSRLLSIVSQRKNRNGI* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2043 499 Pfam Auxin canalisation 29 339 IPR008546 -
Tpr1g2043 499 MobiDBLite consensus disorder prediction 1 30 - -
Tpr1g2043 499 MobiDBLite consensus disorder prediction 121 155 - -
Tpr1g2043 499 PANTHER EXPRESSED PROTEIN 1 498 IPR040269 -
Tpr1g2043 499 MobiDBLite consensus disorder prediction 12 29 - -
Tpr1g2043 499 MobiDBLite consensus disorder prediction 69 84 - -
Tpr1g2043 499 PANTHER AUXIN CANALIZATION PROTEIN 1 498 - -
Tpr1g2043 499 Pfam Plant pleckstrin homology-like region 385 490 IPR013666 -
Tpr1g2043 499 MobiDBLite consensus disorder prediction 54 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2043 Tpr-Chr1 20997811 21002545 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2043 - - gmx:100782024 671.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3523 6 38178442 38180957 Tpr1g2043 1 20997811 21002545 PCT