Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3502 ATGGAACCAAATGTTTTTATGCAGCAGAACAGAATTTCAACACTAACTTCAACTCACTACAACCTCATCAAACATAAACCTCAACAACATCCACCTTATATAGTTTCTGTCCTCAAAAAGCCTTCAAATCATGACATTACAAAAGAAACAACAAAAAATAGTACTACTAATGTATATAAAGATAGTTGGTTTGATCTCATAGCAATAAACCATTTATCAAAAACAGTTCAAGCTGCCACAGGACTAAGTAATAATAAGAGTGGTTATGAGAGCCTTGTTGAGGCAACTTTTATGGTAAAACAGAAATTTAATCCTATTCAACAGCAAGAGGTCATTACCCAAATTCTTGATAGTCTTTTCCCACAGTTAGTATTTACAGTGATAAAGAATCAGCCCCTACCAAATAAACTCACAAGGGAACTTTATGCAATTATCACCACTATGTTATTTACTTGGTTAGTTGGGCCCTCTGAGGTGAGAGAATCAGAGATCAATGGGAGAAGAGAAAAGAATGCAGTATATGTCAAAAAATGCAGGTTCTTAGAGGAGACAAATTGTGTAGGGATGTGTATTAATATGTGCAAAATTCCATCTCAAACGTTTATAAAGAACACTCTAGGTATGCCGGTCAACATGGTACCAAATTTTGAAGACATGAGTTGTGAGATGATATTTGGGCAGGATCCTCCGGCATCAACTGATGATCCATCACTGAACCAACCATGCTATAAAAAATGCAAATCATATAAAAGTCATGGAACAAACTGCCCCAGTTAA 777 0.3565 MEPNVFMQQNRISTLTSTHYNLIKHKPQQHPPYIVSVLKKPSNHDITKETTKNSTTNVYKDSWFDLIAINHLSKTVQAATGLSNNKSGYESLVEATFMVKQKFNPIQQQEVITQILDSLFPQLVFTVIKNQPLPNKLTRELYAIITTMLFTWLVGPSEVRESEINGRREKNAVYVKKCRFLEETNCVGMCINMCKIPSQTFIKNTLGMPVNMVPNFEDMSCEMIFGQDPPASTDDPSLNQPCYKKCKSYKSHGTNCPS* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3502 258 Pfam Beta-carotene isomerase D27-like, C-terminal 152 232 IPR025114 GO:0005506
Tpr6g3502 258 PANTHER BETA-CAROTENE ISOMERASE D27 1 254 IPR038938 -
Tpr6g3502 258 PANTHER BETA-CAROTENE ISOMERASE D27, CHLOROPLASTIC 1 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3502 Tpr-Chr6 37892373 37897368 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3502 K17911 - gmx:100813404 317.775
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3502 6 37892373 37897368 Tpr1g2064 1 21442920 21454017 PCT