Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3488 ATGAAACAATCTCATCATCATCATCGGTGGCAGAGGACTTTGATCCTCTGTCTCCTCTCTCTCTCCGTCGTCGCTCCCGTCCTTTTCCTCTCTCGCCGCCTTCAACTTCTCACTCACGATGGCCGTTCAGATTTTCTTGATGATTTATCTACTGTTAAACACAGAACAGATCTTTTAAAGTCAAATGCTATAGAACAGGAAAACTCAGAAGAATTAGAAGAGCCAAAGCAAGTTGTTTATAAAGAAGATGATGTTGATTCAACGCTTGGTGACGATTCAGAAAACAATAATGATTCTGAAGAGTCTAGAATTGAAGGGTCTAGAAATAATTTTTTGGAAAAAAATGTTTCAGAACTAGACGATGATGAAACACAAGACCAGGAAGCACAGCAGAAAGGAGTGGCCTCCACGGATGAAACACAAGACCAGGAAGCTCAGCAGAAAGGATTGTCCTCCACAGATGGAGATCAGAATATACAAACTCACTCTCAAAGAAAGACAGATCAGAATATTAAAATGAAGGCAAAGCAATCTGGTTTGACAGTAAACCAACATCGTCAGGTTTCACGTCATCAGTCTCGCCGAGTGACAAATCAGACTGTTATGGAGATTAAGGATCAAATTATCAGAGCCAGAGCATATTTGGGCTTTCTTCCACCAAGCAGCAATTCACACTTGGTGAAGGAGTTGAGGTTGGGAATTAGAGAGATGGAACGTGCAGTCGGTGAAGCTACCAAGGGTTCAGATCTTTCAAGGAGTGCTTTGCAGAAAATGAGACACATGGGGGCTTCACTGTCTAAAGCCAGCCGTGCTTTCCCAGACTGTGCTGCTATGGCTTCTAAGCTCCGTGCGATGAATCATAATGCCGAAGAACAAGTTCGTTCTCAGCAACATGAAGTAACACATCTTGTTCATCTTGCTGCAAGGACCACCCCTAAAGGTCTTCACTGCCTTTCTATGCAACTCACTGCTGATTACTTTGCCCTGAGACCTGAGGATAGAAGGCTGCCAAATGAAAATAAGATTCATGATCCGAAACTTTATCATTATGCCGTCTTCTCTGACAATATTCTAGCCTGTGGAGTGGTTGTTAATTCCACCATGTCTAATTCCAAGGAACAGGAAAAACTTGTTTTCCATATAGTGACCAATTCACTCAACTTTCCCGCAATATCAATGTGGTTCATATTAAACCCTCCTGGGAAAGCCGCCATCCACATACAGAACATTGACAATTTTGAGTGGTTGTCCAAGTACAATACATTCAAGAAACAAAGTTCTAATGATCCAAGATATACTTCTGAATTGAACTACCTCCGTTTCTACCTGCCAGATATCTTCCCCACTCTAAATAAGATTTTACTCTTTGATCATGATGTGGTGGTGCAACAAGATCTCAGCACACTATGGAATATTAACATGAATGGAAAAGTAATTGCAGGAGTTGGGACTTGTCAGGAAGGTGAAACTTCATTTCGTAGGATGGATATGCTCATAAACTTCTCAGATCCATACATTGTAGAAAGGTTTGATGTCAATGCTTGCACATGGGCATTTGGGATGAACTTGTTTGATTTGCAGCAGTGGAGGAGACATAATTTAACCGGTGTCTATCACAAATATTTGCAAAGGGGTTCCAAAAAGCCATTGTTTAATGCCGGAAGTCTGCCATTAGGCTGGCTCACCTTCTATAACAAGATTATGGTTTTGGACAGACGGTGGCACATTCTTGGCCTCGGTTATGACTCAGGCATTGACAAAAATAAGATTGAGCAGGCTGCTGTTGTACACTACGATGGAATTAGGAAGCCATGGATGGATATTGGGTTGGGAAGATATAAGAGTTATTGGTCCAATTTTATGAAGTATGACCACCCTATTTTGCGACGTTGCAATATCCAGGCATAG 1908 0.4167 MKQSHHHHRWQRTLILCLLSLSVVAPVLFLSRRLQLLTHDGRSDFLDDLSTVKHRTDLLKSNAIEQENSEELEEPKQVVYKEDDVDSTLGDDSENNNDSEESRIEGSRNNFLEKNVSELDDDETQDQEAQQKGVASTDETQDQEAQQKGLSSTDGDQNIQTHSQRKTDQNIKMKAKQSGLTVNQHRQVSRHQSRRVTNQTVMEIKDQIIRARAYLGFLPPSSNSHLVKELRLGIREMERAVGEATKGSDLSRSALQKMRHMGASLSKASRAFPDCAAMASKLRAMNHNAEEQVRSQQHEVTHLVHLAARTTPKGLHCLSMQLTADYFALRPEDRRLPNENKIHDPKLYHYAVFSDNILACGVVVNSTMSNSKEQEKLVFHIVTNSLNFPAISMWFILNPPGKAAIHIQNIDNFEWLSKYNTFKKQSSNDPRYTSELNYLRFYLPDIFPTLNKILLFDHDVVVQQDLSTLWNINMNGKVIAGVGTCQEGETSFRRMDMLINFSDPYIVERFDVNACTWAFGMNLFDLQQWRRHNLTGVYHKYLQRGSKKPLFNAGSLPLGWLTFYNKIMVLDRRWHILGLGYDSGIDKNKIEQAAVVHYDGIRKPWMDIGLGRYKSYWSNFMKYDHPILRRCNIQA* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3488 635 MobiDBLite consensus disorder prediction 96 118 - -
Tpr6g3488 635 Pfam Glycosyl transferase family 8 317 608 IPR002495 GO:0016757
Tpr6g3488 635 MobiDBLite consensus disorder prediction 173 196 - -
Tpr6g3488 635 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 8 634 IPR029993 GO:0047262
Tpr6g3488 635 Coils Coil 279 299 - -
Tpr6g3488 635 MobiDBLite consensus disorder prediction 66 196 - -
Tpr6g3488 635 SUPERFAMILY Nucleotide-diphospho-sugar transferases 348 632 IPR029044 -
Tpr6g3488 635 MobiDBLite consensus disorder prediction 66 86 - -
Tpr6g3488 635 PANTHER HEXOSYLTRANSFERASE 8 634 - -
Tpr6g3488 635 MobiDBLite consensus disorder prediction 129 166 - -
Tpr6g3488 635 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 350 625 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3488 Tpr-Chr6 37682340 37689898 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3488 9 635 Glycosyltransferase AT1G06780 48.131 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3488 K13648 - gmx:100793193 947.192
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3488 6 37682340 37689898 Tpr1g2078 1 21634257 21640487 PCT