Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3480 ATGGCAGCATCATCTATTGGGTTGATATTTGTCATAATATTGCATTATCGTCTCAAACAGATTAGAGATCAAAAGATTATCCCACGTTTAAGATTATCACGTGGAGGTCATCATACCCCAAAGCTTGAAAGGTTCTCTCATTACGTAGCTAGGCAAATGGGGTTCAAAGATAGGAGAGTCTGTCCTGATCTATGTAGATTGGCTTCTGAATATATAAGCAAATGTGATGGATTTGAAGATGATATATATGCTTACTTTGAGAATGAACCAGATGCTGATTCACTTTATGTGAAGCTGGTAGAGGAATTTGAGAGATGCATTCTTAGTTACTTTGGATTTCATTGGAACCATTGTGATATATTGATAAGTCAGGTGTTGAGCTCGGAAAATTCAGAGCCTAAAAAGAAGTTAAAGCACATAGTTATGGCAGCTACTAGGGAACAGAGGTTCGAGAGAGTTGCGAAGAATCTGAAGGTGGCAAGTGTTTTTAATACATTAGTAGAAGAGATGAAAGCAATGGGAATTGCAGTAAATGATGACTCTCAATGTACAGAGGTAATGGCTCCTGTAGCTCACAGCGACAGGAGTCCAGTCCTCCTTCTAATGGGGGGTGGTATGGGAGCTGGCAAGAGCACAGTACTTAAAGATATTCTCAAAGAACCTTTCTGGGCAGGAGCATCAGCAAATGCTGTAGTCATTGAAGCAGATGCCTTCAAAGAATCAGATGTCATCTATAAAGCACTTTGTTCAAGAGGCCATCATGACATGATTAAGACAGCCGAATTGGTACACCAATCATCCACAGATGCAGCATCATCCCTCCTAGTAACAGCACTAAATGAAGGCCGTGATGTAATTATGGACGGCACACTCTCTTGGGTACCATTTGTTGTGCAGACAATCACAATGGCTAGAAATGTCCATCGCCGCCGTTACCGCATGGGAGTTGGCTACAGAGTGAATGACGATGGAACCGTAACAGAAAACTATTGGGAAAGAATTAAAGATGAGGAACCTGAACAAGTTGAAGGAAAAAAGAGAAAACCATATAGAATCGAGCTAGTTGGAGTAGTGTGTGATGCTTACCTTGCTGTTGTTAGAGGCATAAGGAGAGCTATCATGTGTAGAAGAGCTGTGAGAGTAAGATCACAATTGAAATCCCACAAAAGATTTGCTGATGCATTTATGACATATTGTCAACTAGTAGACAATGCCCGTCTATACTGCACAAATGCATTGGAAGGCCCGGCCAAGTTGATAGGTTGGAAAGAAAGAGACAGGACCTTGCTGGTTGATCCAGATGAATTCGACTGTTTGAAGAGGGTTGCAAAGTTAAATGAAAATGCCAACTCCATATATGAACTCTACAAACCCCCTAACCCAGCTTGTGAAGCTGGATCTGTATGGAAAGACATTGTATTATCTCCTTCAAGGTTGAACATCCAACAGGAGCTCAAATTTTCAATCCAAGAGATTGAACGCTTGAAATGA 1491 0.4105 MAASSIGLIFVIILHYRLKQIRDQKIIPRLRLSRGGHHTPKLERFSHYVARQMGFKDRRVCPDLCRLASEYISKCDGFEDDIYAYFENEPDADSLYVKLVEEFERCILSYFGFHWNHCDILISQVLSSENSEPKKKLKHIVMAATREQRFERVAKNLKVASVFNTLVEEMKAMGIAVNDDSQCTEVMAPVAHSDRSPVLLLMGGGMGAGKSTVLKDILKEPFWAGASANAVVIEADAFKESDVIYKALCSRGHHDMIKTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWVPFVVQTITMARNVHRRRYRMGVGYRVNDDGTVTENYWERIKDEEPEQVEGKKRKPYRIELVGVVCDAYLAVVRGIRRAIMCRRAVRVRSQLKSHKRFADAFMTYCQLVDNARLYCTNALEGPAKLIGWKERDRTLLVDPDEFDCLKRVAKLNENANSIYELYKPPNPACEAGSVWKDIVLSPSRLNIQQELKFSIQEIERLK* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3480 496 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 2 496 - -
Tpr6g3480 496 PANTHER UNCHARACTERIZED 2 496 IPR044802 -
Tpr6g3480 496 Pfam Zeta toxin 191 304 IPR010488 GO:0005524|GO:0016301
Tpr6g3480 496 Gene3D - 180 429 IPR027417 -
Tpr6g3480 496 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 192 327 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3480 Tpr-Chr6 37582329 37585771 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3480 - - gmx:100794775 862.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3480 6 37582329 37585771 Tpr1g2095 1 21866861 21870776 PCT