Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2095 ATGAAGAGAGAGTATTTTGTCAATGGCAAGCCCAGTGTCACACAGATCGTGGTGGCCTCTTCCGTTGGGTTGGTAATTGCTGCAGCAATCCATTATCGCCTAAAATGTTTGAGAGATGGAAAGATCATCCCACGTTTGAGATTATCAAAGGCTGGCGAAACTCCAAAGCTTGAGAGATTCTCTCATTACGTAGCTAGGCAAATGGGGTTCAAAGATAGAAAGAACTGTCCTAACTTATGTAAATTGGCTTCTGAATACATAAGAAAATCTGAGGGATGTGAAGATGATATCTATGCTTTCTTTGAACATGAACAAAATGCAGATTCACTTTTTGTCAAACTTGTGGAGGAGTTTGAGAGATGCATTCTTAGTTACTTTGCTTTCCATTGGAGTCTTGGCGATTTATTGATAAGTCAGGTCTTGAGCTCTGACACTGAGCCAAAAAAGAAGTTCAAGCACATGGTTATGGCAGCAACTAGGGATCAAAGGGTTGAAAGGGTAACAAAGAATTTGAAGGTGGCTAGAGTTTTCAATACATTAGTAGAAGAGATGAAAGCAATGGGACTTGTATCAAATGATGACAATCGATGCACGGAGGTTATGGCACCGGTGGCTCACAGTGATAGGAGTCCTGTGCTCCTTTTCATGGGTGGTGGTATGGGAGCTGGCAAGAGCACTGTGCTTAAAGACATTCTCAAAGAGCCTTTCTGGGTAGGAGCAGCTAGCAATGCTGTTGTCATTGAGGCAGATGCATTTAAAGAATCAGATGTTATCTATAGGGCCCTTAGCTCAAGAGGACAACATCATGACATGATTAAGATGGCTGAATTGGTACACCAATCGTCAACAGATGCGGCCTCATCACTCCTAGTAACGGCACTAAATGAAGGACGAGACGTGATTATGGATGGAACATTTTCTTGGGTACCATTTGTTGTGCAAACAATAACAATGGCTAGGAATGTCCACCGCCGCCGTTACCGAATGGGAGCTGGCTACAAGGTGAATGATGATGGAACTGTAACAGAGAATTACTGGGAACGAATTGAAAATGAAGAACCTGAAGAAGTTGGAGGAAAAAAGAGGAAACCATATAGGTTAGAGCTTGTCGGAGTAGTATGTGATGCTTACCTTGCAGTCATCAGAGGCATAAGGAGAGCTATCATGTGCAGAAGAGCAGTAAGAGTGAAGTCACAATTGAAATCACACAGAAGATTTGCAGATGCATTTATGACTTATTGTCAGCTAGTAGATAATGCAAGGCTATACAGCACAAATGCTTTAGAAGGCCCCCCCAAATTGATAGGATGGAAAGAAAGAGACAAGACATTGCTAGTTGATCCAGATGAAATTGATTGTTTGAAGAGAGTTGCTAGGTTGAATGAAGATGCTGACTCCATATATGAACTTTACAAGCACCCTAATCCAACTTGTGAAGCAGGATCTATATGGAAAGACATTGTATTATCCCCTTCAAGGTTGAACATTCAACAAGAGCTCAAGTGTGCAATTCAAAAGGTTGAGATATTTGCAATGCAAAATCCTAACTTGTTGATGGACAAGTGA 1566 0.4151 MKREYFVNGKPSVTQIVVASSVGLVIAAAIHYRLKCLRDGKIIPRLRLSKAGETPKLERFSHYVARQMGFKDRKNCPNLCKLASEYIRKSEGCEDDIYAFFEHEQNADSLFVKLVEEFERCILSYFAFHWSLGDLLISQVLSSDTEPKKKFKHMVMAATRDQRVERVTKNLKVARVFNTLVEEMKAMGLVSNDDNRCTEVMAPVAHSDRSPVLLFMGGGMGAGKSTVLKDILKEPFWVGAASNAVVIEADAFKESDVIYRALSSRGQHHDMIKMAELVHQSSTDAASSLLVTALNEGRDVIMDGTFSWVPFVVQTITMARNVHRRRYRMGAGYKVNDDGTVTENYWERIENEEPEEVGGKKRKPYRLELVGVVCDAYLAVIRGIRRAIMCRRAVRVKSQLKSHRRFADAFMTYCQLVDNARLYSTNALEGPPKLIGWKERDKTLLVDPDEIDCLKRVARLNEDADSIYELYKHPNPTCEAGSIWKDIVLSPSRLNIQQELKCAIQKVEIFAMQNPNLLMDK* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2095 521 Gene3D - 193 431 IPR027417 -
Tpr1g2095 521 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 7 514 - -
Tpr1g2095 521 PANTHER UNCHARACTERIZED 7 514 IPR044802 -
Tpr1g2095 521 Pfam Zeta toxin 205 317 IPR010488 GO:0005524|GO:0016301
Tpr1g2095 521 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 206 345 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2095 Tpr-Chr1 21866861 21870776 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2095 - - mtr:MTR_1g070385 957.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g2095 1 21866861 21870776 Tpr1g2095 1 21866861 21870776 ECH
Tpr6g3480 6 37582329 37585771 Tpr1g2095 1 21866861 21870776 PCT