Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3451 ATGAATTCTCATTCCATAACTAACTTCCGTTACTCCAACCTCACACTCAATCACAACCGTCCATCATTTCCAACAACCTTATCACCCTCCCTCTCCTTCCGTTCACGTCCACCACCGCAATTCCTCCCTCCGCCGCCGTCGTCGTCGTTCAAACCACCACCAATCAAAGCCTCATCCTCCTCAAACAACCCTCCCTTTCACAAACAACCAAAACCCCCTTCCCTACCTAACCCATTCCAAACCCTAACCTCTCTCTTCTCCCCCGCCATCGAAACCACTTGCATCGTCATTGCCGCAACCGCTTTCTTCTTCATGCGTTTCCATCACTCTCCCGTCATCGCCGCCACCCTCTCTCCTCCATCATCCACCGTCCAAACCACCGAAACTGAAACCGAAACCACCGAAACTGAAAATGAAAACACATCCACTCAAAGAGAACAAGCGGAGAACCTAATCGAAGAGATATTACGCGAAAATCCAAACAACGCTGAAGCTTTACGTGATCTAATGGTAGTGAAAATCAAAGCACAAAAAGTTGATGAAGCGATTCAAGTTATAGACCGTTTGATTCAAATCGAACCTGAAGAAACTGAATGGCCTTTATTGAAAGCTAACATGTATATCTACAACGAAGACATTGAATCTGCTAAGAAATTGTTTGAAGAGATTCTCAAGAAAGATCCACTTAAAGTTGAAGCTTATCATGGTCTTGTAATGGCGACTTCGAAGTCGGATGAACCGTTGAAAGGATTGTTGAATAGAGTTGAAAAAGCAATGGAATTGTGTAAGAAACAGAAAGGGGTTTCTGATGTTAGAGATTTTAGGTTATTGGTTGCTCAGATTAAGGTGATGGAAGAGAATTACCCTGAAGCTCTTAAAGCTTATCAGGATTTGGTGAAAGAAGAACCTAGAGATTTTAGGCCTTATCTTTGTCAGGGTATTATATATACCTTGCTTAGAAAGAAAGATGAAGCTGAGAAGCAATTTGATCAGTTTCGAAGGCTTGTTCCGAAGAATCACCCATATAGAGAGTATTTTGATGATAACATGTATGAAGCCAATAAGCAGAAATTCGAGAAGGAAGGAGCTGGTGCTAGGAGTTGA 1104 0.4257 MNSHSITNFRYSNLTLNHNRPSFPTTLSPSLSFRSRPPPQFLPPPPSSSFKPPPIKASSSSNNPPFHKQPKPPSLPNPFQTLTSLFSPAIETTCIVIAATAFFFMRFHHSPVIAATLSPPSSTVQTTETETETTETENENTSTQREQAENLIEEILRENPNNAEALRDLMVVKIKAQKVDEAIQVIDRLIQIEPEETEWPLLKANMYIYNEDIESAKKLFEEILKKDPLKVEAYHGLVMATSKSDEPLKGLLNRVEKAMELCKKQKGVSDVRDFRLLVAQIKVMEENYPEALKAYQDLVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFDQFRRLVPKNHPYREYFDDNMYEANKQKFEKEGAGARS* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3451 367 Pfam Tetratricopeptide repeat 146 204 - -
Tpr6g3451 367 MobiDBLite consensus disorder prediction 118 145 - -
Tpr6g3451 367 Gene3D Tetratricopeptide repeat domain 267 360 IPR011990 GO:0005515
Tpr6g3451 367 MobiDBLite consensus disorder prediction 36 52 - -
Tpr6g3451 367 ProSiteProfiles TPR repeat profile. 163 196 IPR019734 GO:0005515
Tpr6g3451 367 Gene3D Tetratricopeptide repeat domain 134 266 IPR011990 GO:0005515
Tpr6g3451 367 MobiDBLite consensus disorder prediction 25 72 - -
Tpr6g3451 367 SUPERFAMILY TPR-like 145 340 IPR011990 GO:0005515
Tpr6g3451 367 Coils Coil 131 158 - -
Tpr6g3451 367 SMART tpr_5 272 305 IPR019734 GO:0005515
Tpr6g3451 367 SMART tpr_5 306 339 IPR019734 GO:0005515
Tpr6g3451 367 SMART tpr_5 197 230 IPR019734 GO:0005515
Tpr6g3451 367 SMART tpr_5 163 196 IPR019734 GO:0005515
Tpr6g3451 367 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 11 352 - -
Tpr6g3451 367 Pfam Tetratricopeptide repeat 286 338 - -
Tpr6g3451 367 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 11 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3451 Tpr-Chr6 37267621 37270761 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3451 - - gmx:102661172 402.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3451 6 37267621 37270761 Tpr1g2155 1 22885569 22886603 PCT