Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2155 ATGAATTCTCTCCCCAAAACTCATCACCTCTCTTTCACTTACCACCATTCTTCATTGCAAACATCATTCTCTTTTCCCTCTTTACTTTCTCACCAATTCTCTTCTTCACCCTTATTACTACCCTCCATCAAAGCCTCTTCCTCATCCTCACCAAAAAATAACAACAACCCTTTTCAAAAACCCCAAAACGCTTTTTCCCAATTCCTCCGAACCCTAAACCCCTTTTACTCACCTCTCTTCGAACCCGCCTATGTCGCAGCAACACTTATCTTTTTCTTCTTGTTCCGCGTTCATCAAAATCCCACCACCGTCACACCATCACTCCTACCTCCTCCGCCGGCGGACTCTTCCACCACCGCCACCGCAACCGGAAATCTATCTATTATAGAAAGCGATACTTCGATTGAAAATTCCAACGACGCAAACGCTCTTCGGTCTTTGGTTGAGGAAAATGTTAGAGCTCGCAAACTCAAAGAGGCAATTCGTGTTGTGGACCGTTTGATCGAACTCGAACCCGTTGATTTAGCTTTGATATTACTAAAATCGCAGTTGCATAGTCACAATGGTGAACATAAATTGGCTAAGAAAGGGTTTGAACTTACTTTGCAGCAAGATCCGTTAAACTTGGTAGCTTATCGCGGTCTTTTGATGGCAATTTCAAACTTGGAAGAACCAATGGAGGTTTTTTTGAAGAAGGTTGATGAGATGGTGAAGTTTTTTGAGGAGAAAAAGATGGAATCAGAAGCTAGGGAATTTAAGCTTTTGATTGCGCAGGTGAAGGTGATGGAAGAGGATTTCTCCGGTGCATTGAAGGTGTATGAGCAAATTGTGAAGGAAGAACCGAGTGATTTTAGACCTTATTTGTGTCAAGCTGTTGTGTATACTCTGCTTAGAAAGAATGATGAAGCTGAGAAACAGTTTCAGGAGTATAGGAAACTTGTTCCAGAGAATCATCCTTATAAAAAGTATTTTGAGGATAATACTAAGATTTTGTCCAAGAAGCTAGAGAAGGGAGGAATAGAAGCAAGTATTTGA 1035 0.4135 MNSLPKTHHLSFTYHHSSLQTSFSFPSLLSHQFSSSPLLLPSIKASSSSSPKNNNNPFQKPQNAFSQFLRTLNPFYSPLFEPAYVAATLIFFFLFRVHQNPTTVTPSLLPPPPADSSTTATATGNLSIIESDTSIENSNDANALRSLVEENVRARKLKEAIRVVDRLIELEPVDLALILLKSQLHSHNGEHKLAKKGFELTLQQDPLNLVAYRGLLMAISNLEEPMEVFLKKVDEMVKFFEEKKMESEAREFKLLIAQVKVMEEDFSGALKVYEQIVKEEPSDFRPYLCQAVVYTLLRKNDEAEKQFQEYRKLVPENHPYKKYFEDNTKILSKKLEKGGIEASI* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2155 344 Gene3D Tetratricopeptide repeat domain 251 343 IPR011990 GO:0005515
Tpr1g2155 344 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 2 338 - -
Tpr1g2155 344 SUPERFAMILY TPR-like 140 320 IPR011990 GO:0005515
Tpr1g2155 344 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 2 338 - -
Tpr1g2155 344 Gene3D Tetratricopeptide repeat domain 129 250 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2155 Tpr-Chr1 22885569 22886603 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2155 - - cam:101497721 387.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3451 6 37267621 37270761 Tpr1g2155 1 22885569 22886603 PCT