Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3411 ATGGAGGAAGCGTTGGAACTTGCACGCGCTAAAGATACAAAGGAAAGGATGGCTGGTGTAGAACGTCTCTACCAAATTCTAGAAGCTTCTAGAAAGAGTCTTACATCTTCTGAAGTTACTTCGCTCGTTGATTCTTGCATCGATCTCTTGAAGGATAATAATTTCCGTGTTTCTCAGGGCGCACTTCAATCTCTTGCTTCCGCCGCTGTTCTCTCCGGCGAACACTTTAAGCTTCATTATAACGCTCTTCTTCCTGCCGTTGTTGACCGTCTCGGTGACGGTAAACAGCCTGTTCGTGACGCCGCACGACGGCTCCTTCTCACACTCATGGAGGTTTCTTCTCCTACAATAATTGTTGAAAGAGCAGGATCCTCAGCTTGGGCACACAAAAGCTGGAGAGTCAGAGAGGAGTTTACGCGAACTGTAACATCTGCAATTAATCTATTTTCAGCTACCGAACTTCCACTTCAACGGGCTATCCTTCCTCCTGTTTTGCAGTTGCTGAATGACCCAAATCTTGCTGTTAGGGAAGCGGCTATTTTGTGCGTTGAGGAAATGTATACACAAGCTGGACCTCAATTTCGTGATGAACTTCACCGCTACAATCTTCCTTCATCTTTGGTGAAAGATATTAATGCCAGGTTAGAGAGTATTCAACCAAAAGTTCGCTCAGATGGTATTCAACCAGGTTATATGACTGGGGAAATTAACCCTAAACCCAAGAGAAATAGTCCAAAGGCCAAAAGTTCTTCAAGGGAGGCCTCTCTTTTTGGAGCAGAAGGGGATGTCACGGAGAAACCCATAGACCCTGTCAAGGTGTACTCAGATAAGGAGTTAATCAGGGAAATTGAGAAGATTGCATCTATCCTTGTGCCTGAAAAAGACTGGTCTGTTCGTATTGCTGCTATGCAGAGAATTGAGGGTCTTGTTCTAGGAGGCGCTGCTGATTATCCATGTTTTCGAGGACTCCTTAAGCAACTTGGTGGACCTTTAAGTACACAATTGTCAGACAGAAGATCTAGCATTGTAAAACAGGCTTGCCATTTATTGTGCTTTTTGTCAAAGGAACTCTTGGGTGATTTTGAAGCATATGCCGAAATGTTTATACCCGTCCTTTTCAAGCTGGTTGTGATTACTGTGCTTGTAATTGCAGAGTCTGCAGATAACTGCATAAAAACGATGCTGCGCAACTGCAAAGTTGCCCGTGTGCTTCCCCGAATAGCTGACTGTGCTAAAAATGATCGCAATGCAGTACTTCGTGCAAGGTGCTGTGAATATGCTCTTTTGGTCATAGAACATTGGCCGGATGCACCAGAAATACATCGTTCAGCAGAGTTATATGAGGATATGATTAAGTGTTGCGTTTCAGATGCAATGAGTGAGGTACGATCTACTGCAAGAATGTGCTACAGAATGTTTGCAAAAACTTGGCCAGAGCGTTCACGTCGCTTATTTTCATCCTTTGACCCTGTTATTCAACGGTTAATAAATGAAGAGGATGGAGGAATACACAGGCGACATGCTTCACCTTCCATTCGTGATAGAGGTGCACTGATGTCACTACCCAGTCAAGCCTCTGCTTTGTCTAATCCACCTGGTTATGGAACATCTGCAATTGTTGCAATGGATAGAAGTTCAAGTTTATCATCAGGGACATCTATCTCCTCTGGTGTACTTCTTTCACAGACGAAGCCACTTGGTAAGGGTACAGAACGTAGTTTGGAAAGTGTGTTGCATGCAAGCAAACAGAAGGTCTCTGCTATTGAAAGCATGCTTAGGGGCTTGAATATGTCTGATAAGCACAATTCATCTACTCTCCGGTCATCAAGTTTGGATCTAGAAGTTGACCCTCCATCGTCTCGTGATCCGCCTTTCCCAGCTGCTGTCTCTGCAACCAATCATTTGACAAGCTCTTCAACAGCAGAACCTACTGCTTATGGTGTCTATAAAGGTAGCAACCGAAATGGTAGTCTGGGTTTGTCCGACATAATCACTCAAATTCAAGCTTCCAAAGATTCTGCAAAGTCATCATATCATAGTAATGTTGATATTGAGCCTTTACCATCATCTTCCTCATATTCAACTAGAAGGCCTTCTGAAAGATTACAAGAAAGACGTCCTGTTGATGACAATAGTGACATTAGGGAGGCTAGGCGATTTATGAACCACACCACTGATAAGCAGTATTTGGATGCCCCATATAGAGATGGAAACTTTAGGGAATCACATAATAGCCATGTGCCTAATTTTCAGAGACCGCTAGTGAGAAAGAATGCAGCTGGACGTCTGTCTGCTGGCAGGAGGAAGAGTTTTGATGATAACCAGCTATCTCCTGGAGAGATGTCAAGTTATGCAGATGGACCAGCATCTCTTCATGAAGCTTTGAGTGAAGGACTTAGGTCAGGTTCTGACTGGTCTTCTAGGGTTGCTGCATTTAATTATCTTCACTCGTTGTTGCAGCAAGGTCCAAAGGGAACTCTAGAAGTTGTTCAGAATTTTGAGAAGGTAATGAAGTTGTTTTTCCAGCACTTGGATGATCCTCACCATAAAGTTGCACAAGCTGCTCTTTCAACACTAGCAGATATTGTTCCAGCATGTCGAAAGCCTTTTGAGGGTTACATGGAAAGAATATTACCACATGTCTTTTCTCGGTTAATTGATCCTAAAGAGGTTGTTAGGCAGCCATGTTCAACAACATTGGACGTTGTTACCAGAACTTACAGTATTGATTCTCTCTTACCTGCACTGTTACGTTCTCTAGACGAACAAAGGTCTCCAAAGGCTAAATTGGCCGTGATTGAATTCGCAATCAATTCCTTTAACAAACATTCAATGAATGCAGAAGGTGCTGCTAATATTGGCATACTAAAATTGTGGCTCGCTAAGTTAACCCCTTTGGTTCATGATAAAAATACAAAGCTTAAAGAAGCAGCTATTACTTGCATTATATCAGTGTATACTCACTTTGATTCAACTGCAGTTCTTAATTTCATTCTGAGTTTGTCGGTGGAAGATCAAAATTCTTTGAGACGAGCCCTTAAACAGTACACCCCTCGCATCGAAGTAGACCTAATAAACTATCTGCAGAACAAGAAAGAGCGACAACGTTCCAAGTCTTCCTATGATCCATCTGATGTTGTAGGAACATCATCTGAAGACGGGATTGTTGGTTTCTCTAGGAAAGCTCATTACCTTGGAAGATATTCGGTTGGTTCCCTAGAAAGTGATGGTGGCAGAAAGTGGAGCTCCCAGGATTCAACTATTTTGAAATCCAGTCTTGGTCCCGTAACTTCTGTTGAAAGTGAGGACAATAATCATAACCATAATCTTGAGACTGATTCTAATTGTGATAATCTTCATTCAAAATCCAAAGATCATGCATATTCAGTCAATCCAATGGGTCAAGATTTCAGCTCTCAATCTAATCAACTTGGACATGTGGACAGTAGCATGGATTTTGAGGGCCTTTCAACTCCTCGTCTAGATGTTAATTGTCTGGTGTCATTAGAGCGTTTAAATGTTGGTGAAGGCTATGCACATGACAAAGAACTTCCTTCTGTATTGGAGCTTAATCAACACACAAATGAAGCTGTAAAGATTAACTCCATGACAGACACTGGGCCCAGTATTCCTCAAATTCTTCATATGATATGCAATGCCGATGATGGAAGCCCTGTTTCTAGTAAACAGGCTGCACTTCAACAGTTATTTGACGCTTCTATTACAAATGATCAGGCTGTATGGACTAAGTACTTCAATCAAATTTTGACCGCTGTGCTTGAGGTGCTGGATGATTTGGATTCCTCAGTCAGAGAGCTTGCTCTTTCATTGATAGTTGAAATGCTCAAAAACCAGAAAGATGCTCTGGAGAATTCAGTTGAGATTGTAATTGAGAAGCTGCTTCATGTTACAAAAGATGTCGTTCCTAAGGTTTCAAATGAAGCAGAGCATTGCCTGACCATTGTTTTATCTCTTTATGATCCATTCAGATGTTTAAGTGTTATTGTCCCTCTACTGGTTACCGAGGATGAGAAAACTCTTGTCACTTGCATTAATTGCTTAACAAAGCTTGTGGGCAGGCTCTCTCAGGAGGAACTGATGGCTCGGTTACCCTCGTTTCTGCCTGCTCTTTTTGAAGCTTTTGGAAACCAGAGTGCAGATGTTCGCAAGACTGTCGTTTTCTGTCTCGTGGATATTTATATAATGCTTGGGAAAGCATTCTTGCCATATTTGCAAGGCCTTAACAGCACACAGTTGAAGCTGGTCACTATTTATGCTAATCGAATCTCACAAGCCAGGACAGGCAAAGCAATTGATGCCGTTCATGATTAG 4332 0.4224 MEEALELARAKDTKERMAGVERLYQILEASRKSLTSSEVTSLVDSCIDLLKDNNFRVSQGALQSLASAAVLSGEHFKLHYNALLPAVVDRLGDGKQPVRDAARRLLLTLMEVSSPTIIVERAGSSAWAHKSWRVREEFTRTVTSAINLFSATELPLQRAILPPVLQLLNDPNLAVREAAILCVEEMYTQAGPQFRDELHRYNLPSSLVKDINARLESIQPKVRSDGIQPGYMTGEINPKPKRNSPKAKSSSREASLFGAEGDVTEKPIDPVKVYSDKELIREIEKIASILVPEKDWSVRIAAMQRIEGLVLGGAADYPCFRGLLKQLGGPLSTQLSDRRSSIVKQACHLLCFLSKELLGDFEAYAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRNAVLRARCCEYALLVIEHWPDAPEIHRSAELYEDMIKCCVSDAMSEVRSTARMCYRMFAKTWPERSRRLFSSFDPVIQRLINEEDGGIHRRHASPSIRDRGALMSLPSQASALSNPPGYGTSAIVAMDRSSSLSSGTSISSGVLLSQTKPLGKGTERSLESVLHASKQKVSAIESMLRGLNMSDKHNSSTLRSSSLDLEVDPPSSRDPPFPAAVSATNHLTSSSTAEPTAYGVYKGSNRNGSLGLSDIITQIQASKDSAKSSYHSNVDIEPLPSSSSYSTRRPSERLQERRPVDDNSDIREARRFMNHTTDKQYLDAPYRDGNFRESHNSHVPNFQRPLVRKNAAGRLSAGRRKSFDDNQLSPGEMSSYADGPASLHEALSEGLRSGSDWSSRVAAFNYLHSLLQQGPKGTLEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIVPACRKPFEGYMERILPHVFSRLIDPKEVVRQPCSTTLDVVTRTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAINSFNKHSMNAEGAANIGILKLWLAKLTPLVHDKNTKLKEAAITCIISVYTHFDSTAVLNFILSLSVEDQNSLRRALKQYTPRIEVDLINYLQNKKERQRSKSSYDPSDVVGTSSEDGIVGFSRKAHYLGRYSVGSLESDGGRKWSSQDSTILKSSLGPVTSVESEDNNHNHNLETDSNCDNLHSKSKDHAYSVNPMGQDFSSQSNQLGHVDSSMDFEGLSTPRLDVNCLVSLERLNVGEGYAHDKELPSVLELNQHTNEAVKINSMTDTGPSIPQILHMICNADDGSPVSSKQAALQQLFDASITNDQAVWTKYFNQILTAVLEVLDDLDSSVRELALSLIVEMLKNQKDALENSVEIVIEKLLHVTKDVVPKVSNEAEHCLTIVLSLYDPFRCLSVIVPLLVTEDEKTLVTCINCLTKLVGRLSQEELMARLPSFLPALFEAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLQGLNSTQLKLVTIYANRISQARTGKAIDAVHD* 1444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3411 1443 Gene3D - 795 1017 IPR011989 -
Tpr6g3411 1443 MobiDBLite consensus disorder prediction 227 259 - -
Tpr6g3411 1443 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
Tpr6g3411 1443 MobiDBLite consensus disorder prediction 598 623 - -
Tpr6g3411 1443 Gene3D - 1 222 IPR011989 -
Tpr6g3411 1443 Gene3D - 1224 1435 IPR011989 -
Tpr6g3411 1443 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Tpr6g3411 1443 SUPERFAMILY ARM repeat 5 398 IPR016024 -
Tpr6g3411 1443 MobiDBLite consensus disorder prediction 598 615 - -
Tpr6g3411 1443 MobiDBLite consensus disorder prediction 672 724 - -
Tpr6g3411 1443 Gene3D - 263 502 IPR011989 -
Tpr6g3411 1443 MobiDBLite consensus disorder prediction 672 697 - -
Tpr6g3411 1443 Pfam CLASP N terminal 799 993 IPR024395 -
Tpr6g3411 1443 Pfam CLASP N terminal 280 496 IPR024395 -
Tpr6g3411 1443 PANTHER PROTEIN, PUTATIVE-RELATED 28 1435 - -
Tpr6g3411 1443 Pfam HEAT repeat 160 187 IPR000357 GO:0005515
Tpr6g3411 1443 PANTHER CLASP 28 1435 - -
Tpr6g3411 1443 SUPERFAMILY ARM repeat 286 1433 IPR016024 -
Tpr6g3411 1443 Coils Coil 1279 1299 - -
Tpr6g3411 1443 MobiDBLite consensus disorder prediction 698 724 - -
Tpr6g3411 1443 SMART TOG_3 780 1022 IPR034085 -
Tpr6g3411 1443 SMART TOG_3 278 510 IPR034085 -
Tpr6g3411 1443 SMART TOG_3 1199 1435 IPR034085 -
Tpr6g3411 1443 SMART TOG_3 3 224 IPR034085 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3411 Tpr-Chr6 36828039 36844343 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3411 K16578 - gmx:100796697 2425.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3411 6 36828039 36844343 Tpr6g3411 6 36828039 36844343 ECH
Tpr6g3411 6 36828039 36844343 Tpr1g4074 1 46225565 46239746 PCT