Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3395 ATGGCTTCAGATTCCAATTCAAATCTTAGAATCACCATTGAAAGAAACCCTTCTCAGTCACGTCTAGCTGAATTAAACATCAAATGTTGGCCTAAATGGGGTTGTTCACCAGGAAAATACCAATTGAAATTTGATGCTGAAGAAACATGCTATTTATTGAAAGGAAAAGTGAAAGCATACACAAAAGGGTCATCAGATTTTGTAGAGTTTGGAGCTGGAGACCTTGTCACCATTCCAAAAGGACTCAGTTGTACTTGGGATGTTTCTGTTGCTGTTGACAAGTACTATAAATTTGAATCTTCTTCTTCTTCTTCATCTTCACCATCTTGTTAA 333 0.3664 MASDSNSNLRITIERNPSQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYTKGSSDFVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFESSSSSSSSPSC* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3395 110 PANTHER RMLC-LIKE JELLY ROLL PROTEIN-RELATED 2 105 - -
Tpr6g3395 110 Pfam EutQ-like cupin domain 23 96 IPR008579 -
Tpr6g3395 110 CDD cupin_TM1112-like 30 98 - -
Tpr6g3395 110 Gene3D Jelly Rolls 2 98 IPR014710 -
Tpr6g3395 110 PANTHER OS04G0445200 PROTEIN 2 105 - -
Tpr6g3395 110 SUPERFAMILY RmlC-like cupins 20 96 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3395 Tpr-Chr6 36643082 36643729 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3395 - - gmx:100793722 204.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3395 6 36643082 36643729 Tpr6g3395 6 36643082 36643729 ECH
Tpr6g3395 6 36643082 36643729 Tpr1g2159 1 22987057 22989486 PCT