Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3348 ATGGGTATCCTCAGAACAAAACAAACACTCTCATTTCTCATTCTATTCAATCTTTCATCACTTGTTTTCACAACAACCGATAACACAAACGTTGTCTACAAAGGTTGTTCAGAGCAAAAACTACCACAACAATCTTCACCAAATCTCCAATCACTGCTATCATCTCTTGTATCAGCATCAGCACAAAAAACTTTCGCCGCCACAACCACCGGCGACGGTCAAAGCGCAGTCACTGGTGTTTACCAATGCAGAGGTGACCTTTCAACTTCTGATTGTTATCTTTGTGTCAGCAAAATTCCAAGAAAGATAAGTAAGCTTTGCGGCGAAGTTGCGGCGGCGAGAATTCAGCTCAGTGGATGTTATTTAAGGTACGAGGTTGTTGGGTTTAAGCAAGTTCCTATGACTCAATTGCTTTATAAGGTTTGTGGTTCAAAGAAAGTTAATGATGGTGTTGGGTTTGAGGCTAAGAGGGATTCTGGTTTTGGAATGGTGGAAAATGGTGTGAAGAATGGTGGGAATTTGTTCTATACAGGGAGTTATATGTCTTTGTATGTTTTGGGTCAATGTGAGGGTAGTTTGGGAAATGGTGATTGTGGTGATTGTATTAAGACTGCTGAAGAACAAGCTAAATTGGAATGTGGTGATTCAATTTCAGCTCAGATTTATTTGTTTAGTTGCTTTATCAGTTATAGTTTTTATCCCAATGGAGTTTCTAGCACATCTTCTTCCTCTTCAGGATCAGGAGGGAATCCACACACAGAGAGGACAGTGGCTCTAGCAGTTGGAGGAGTAGCAGCTGTTGGATTCTTCGTTGTTTGTTTGATGTTTCTTAGATCAGTGCTTAAGAAAAAAGGTGGAAAGTATTGA 867 0.4025 MGILRTKQTLSFLILFNLSSLVFTTTDNTNVVYKGCSEQKLPQQSSPNLQSLLSSLVSASAQKTFAATTTGDGQSAVTGVYQCRGDLSTSDCYLCVSKIPRKISKLCGEVAAARIQLSGCYLRYEVVGFKQVPMTQLLYKVCGSKKVNDGVGFEAKRDSGFGMVENGVKNGGNLFYTGSYMSLYVLGQCEGSLGNGDCGDCIKTAEEQAKLECGDSISAQIYLFSCFISYSFYPNGVSSTSSSSSGSGGNPHTERTVALAVGGVAAVGFFVVCLMFLRSVLKKKGGKY* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3348 288 ProSiteProfiles Gnk2-homologous domain profile. 27 129 IPR002902 -
Tpr6g3348 288 Gene3D - 134 234 IPR038408 -
Tpr6g3348 288 Gene3D - 27 129 IPR038408 -
Tpr6g3348 288 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 9 285 - -
Tpr6g3348 288 PANTHER PLASMODESMATA-LOCATED PROTEIN 1 9 285 - -
Tpr6g3348 288 Pfam Salt stress response/antifungal 175 232 IPR002902 -
Tpr6g3348 288 Pfam Salt stress response/antifungal 45 125 IPR002902 -
Tpr6g3348 288 ProSiteProfiles Gnk2-homologous domain profile. 135 235 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3348 Tpr-Chr6 36142179 36144098 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3348 42 287 Receptor kinase-like Gene Family AT1G70530 27.341 6.18e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3348 - - gmx:100786830 378.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3348 6 36142179 36144098 Tpr6g3348 6 36142179 36144098 ECH
Tpr6g3348 6 36142179 36144098 Tpr1g1575 1 14645639 14647285 PCT