Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1575 ATGAATTTTTTCCAATATTCCACCACAATCTTCTTCATTAGTATCACTTTCTTGCTCTTTTTACCTTCTTCAAAACCAATTTCCAATTACAACACATTAGTATACAAAACATGTTCAACACAAACCTTCAACCATGAATCTTATTCTCAATCACTAGATTCCTTATTCCAACAACTCATAACACAATCATCTCAACACAAATTCTTCAAAACCAACGAAGCTATCAACGACCACACCTTCATATCCGGCTTTTTTCAATGTAGAAACGACATCAACAACGAAGATTGTTTCACATGTGTAACATCTTTACTTCCTCATATATCAAACACCTTGTGCAACGATTCCACGTCCGCACGATTACAACTTCAAGGTTGCTACGTTCAATATCGAACGGAACAATTTCAAGAAAAAACTATTCGTGAATCCAAAAACAACGAAATGTTCCACAAGATTTGTCGAGTACCTGTTGTAGAATATTATGTTGAGTTTAAAGAGTTGATGGAAGAAGCATTTATGATGCTTGAAAATGGGATTATAAATAGTGATGGGTTTTATGCAATGGATTATAAAAAAGTGAAATTGATGGCACAGTGTGAAAGTGGTTTGAGAACTTGTGATTGTAGTGAATGTGTTAATGATGCAGTTATGGTTGCCAAGGAAGAATGTGACGGTTCAGCTTCAGCAAAAATATATTTTGATAAGTGTTTTATAAGCTATACATATATGCTCAAATCAGGTAATGGTGATGATGATAGCTATGTTCCAGGGGCAAGCAGAAACAACAACAGTCAAAAGTCCCAAAAATTGATAGCAATAATAGTTGGAGGGGCTGCAACTCTGTTTTTGGGTCTGATATTTGTCTCCCTACTTAACTCTCGGCTTAGAAAAGATGACTATGAGTAG 903 0.3522 MNFFQYSTTIFFISITFLLFLPSSKPISNYNTLVYKTCSTQTFNHESYSQSLDSLFQQLITQSSQHKFFKTNEAINDHTFISGFFQCRNDINNEDCFTCVTSLLPHISNTLCNDSTSARLQLQGCYVQYRTEQFQEKTIRESKNNEMFHKICRVPVVEYYVEFKELMEEAFMMLENGIINSDGFYAMDYKKVKLMAQCESGLRTCDCSECVNDAVMVAKEECDGSASAKIYFDKCFISYTYMLKSGNGDDDSYVPGASRNNNSQKSQKLIAIIVGGAATLFLGLIFVSLLNSRLRKDDYE* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1575 300 ProSiteProfiles Gnk2-homologous domain profile. 145 244 IPR002902 -
Tpr1g1575 300 Pfam Salt stress response/antifungal 188 240 IPR002902 -
Tpr1g1575 300 Pfam Salt stress response/antifungal 38 131 IPR002902 -
Tpr1g1575 300 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 4 299 - -
Tpr1g1575 300 ProSiteProfiles Gnk2-homologous domain profile. 30 134 IPR002902 -
Tpr1g1575 300 Coils Coil 299 300 - -
Tpr1g1575 300 Gene3D - 30 134 IPR038408 -
Tpr1g1575 300 Gene3D - 145 242 IPR038408 -
Tpr1g1575 300 PANTHER PLASMODESMATA-LOCATED PROTEIN 4 4 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1575 Tpr-Chr1 14645639 14647285 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1575 4 254 Receptor kinase-like Gene Family AT5G40380 25.483 1.89e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1575 - - gmx:100795973 360.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1575 1 14645639 14647285 Tpr1g1575 1 14645639 14647285 ECH
Tpr6g3348 6 36142179 36144098 Tpr1g1575 1 14645639 14647285 PCT