Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3338 ATGACAATGGTAGGAGAAAAGGGCAGTGCTAGAGGAAAAGAAGATTATACTGAAGATGGCACAGTGGACCTTAAAGGTAGACCAGTTTTAAGATCAAATACAGGAAGATGGAGAGCTTGTTCTTTCATAGTAGGGTATGAAATGATTGAAAGGATGGCATACTATGGAATAGCATCAAATCTAGTATTGTATCTAACAAAGAAGCTTCATGAGGGTACTGTCAAATCTTCAAACCATGTTACCAATTGGGCTGGTACAGTTTGGATCATGCCAGCTGCTGGTGCTTACATAGCTGATGCCTATCTTGGTCGATATTGGACCTTTGTCATATCATCAGCCATTTACTTTTTGGGAATGTGTTTATTAACTCTAACAGTATCACTACCAATGTTGAGACCACCACCTTGTGGTCAAGATATAGCAGACAAAGATTGCCCAAAAGCTTCATCATTCCAAATTGGTATTTTCTTCTTTGCTTTGTACATCATTGCAGTAGGCACAGGTGGAACTAAGCCAAACATTTCCACAATGGGAGCTGACCAATTTGACGAGTTCGAGCCCAAAGAGAGGTCCCAAAAACTTTCCTTTTACAATTGGTGGGTTTTTTATATTTTAATTGGAACCATTTCAGCCCAAACAGTATTGGTTTATATACAAGACAATGTTGGTTTTAGCCTTGGATATGGGATTCCAACCATTGGACTTGTTATATCCATATTGATTTTTGTGTTAGGAACACCACTTTATAGACATAGATTACCCTCTGGAAGCCCTTTAACTAGGATGGTTCAAGTCTTTGTGTCTGCTATGAGAAAGTGGAAATTAAATGTCCCAATTGATTCAAAAGAACTACATGAGGTCAGCATTGAAGAGTATACAAGTAAAGGAAGGTATAGAATTAATCACAGCTCTTCATTAAGATTCCTTGACAAAGCTGGACTGAATACTGGCCAAACATCACCATGGATGCTTTGTACTGTGACACAAATTGAGGAAACAAAACAAATGATAAAAATGATTCCTATATTGATTACAACATGTATTCCAAGCACAATTATAGCTCAAACAACCACACTCTTCATAAGACAAGGCACGACACTAGACAGGAGAATGGGACCTCATTTTAAAATTCCTCCGGCATGTCTCATAGCATTTGTAAATATCTTCATGCTGATAAGCGTTGTAATCTATGATCGCATTTTTGTTCCTGCTATCCGACGCTACACAAAGAATCCAAGAGGAATCACAATGCTACAAAGACTAGGAACCGGCCTGGTTATGCACGTCATTATAATGGCTATTGCATGCCTTATCGAGAGAAAGAGACTCGGCGTTGCTAGAGATAGCAACCTATTAGGCATGCACGATACGATCCCTCTTTCCATTTTCATTCTCGTCCCTCAATTCGCTTTAATGGGGATTGCCGATACGTTTGTTGATGTTGCTAAGCTAGAGTTTTTCTATGATCAAGCACCTGAATCCATGAAAAGTCTTGGAACATCATATTGTACCACAACATTGAGCATTGGGAATTTTTTGAGTACTTTTCTTCTATCAACTGTTGCTGATCTCACAAGTAAACATGGTCATAAGAGTTGGATTAAGGATAATCTAAATGTCTCACGTTTAGATTATTATTATGCTTTTTTGGCCTTGTTGAGTGTTGTCAATTTCATTTGTTTCTTTGTTATTGCCAAATTCTTTGTATATAATGAGGATGTAACACAAACCAAAATGAACTTAGAGATGAACCACCCTGCTTATAAGACTGAAATAAGTCAAAGTATCTCACAACTAGATGCATCCTAG 1809 0.3792 MTMVGEKGSARGKEDYTEDGTVDLKGRPVLRSNTGRWRACSFIVGYEMIERMAYYGIASNLVLYLTKKLHEGTVKSSNHVTNWAGTVWIMPAAGAYIADAYLGRYWTFVISSAIYFLGMCLLTLTVSLPMLRPPPCGQDIADKDCPKASSFQIGIFFFALYIIAVGTGGTKPNISTMGADQFDEFEPKERSQKLSFYNWWVFYILIGTISAQTVLVYIQDNVGFSLGYGIPTIGLVISILIFVLGTPLYRHRLPSGSPLTRMVQVFVSAMRKWKLNVPIDSKELHEVSIEEYTSKGRYRINHSSSLRFLDKAGLNTGQTSPWMLCTVTQIEETKQMIKMIPILITTCIPSTIIAQTTTLFIRQGTTLDRRMGPHFKIPPACLIAFVNIFMLISVVIYDRIFVPAIRRYTKNPRGITMLQRLGTGLVMHVIIMAIACLIERKRLGVARDSNLLGMHDTIPLSIFILVPQFALMGIADTFVDVAKLEFFYDQAPESMKSLGTSYCTTTLSIGNFLSTFLLSTVADLTSKHGHKSWIKDNLNVSRLDYYYAFLALLSVVNFICFFVIAKFFVYNEDVTQTKMNLEMNHPAYKTEISQSISQLDAS* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3338 602 PANTHER PEPTIDE TRANSPORTER 19 583 - -
Tpr6g3338 602 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 19 583 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tpr6g3338 602 Gene3D MFS general substrate transporter like domains 9 577 IPR036259 -
Tpr6g3338 602 CDD MFS_NPF5 37 570 IPR044739 GO:0042937|GO:0042938|GO:0071916
Tpr6g3338 602 Pfam POT family 105 534 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tpr6g3338 602 SUPERFAMILY MFS general substrate transporter 27 566 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3338 Tpr-Chr6 36013943 36017233 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3338 14 586 Organic Solute Cotransporters AT5G46040 59.028 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3338 - K14638 gmx:100787001 1003.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3338 6 36013943 36017233 Tpr1g2682 1 30818310 30825047 PCT