Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2682 ATGGAAGATGGGAGGGTGGTGAGTGATGAGTTGACACAAGATGGAAGTGTTAATCTTAAAGGGAAACCAATTCTCAAATCCAAAACTGGTTGTTGGAAAGCTTGCTCCTTCTTTGTTGTGTATGAGGTATTTGAGAGAATGGCTTATTATGGGATATCATCAAATTTGATCTTATATTTGATAAAGAAGCTTCATCAAGGTACTGTGACTTCTTCTACCAATGTCACCAATTGGGTTGGTACCATTTGGATCACTCCAATATTAGGTGCTTATGTTGCTGATGCCTACCTTGGCCGCTATTGGACTTTTGTCACTGCCTCTGTTATCTATCTATTGGGTATGTCTATGCTTACACTATCAGTTTCCCTTCCAAGCCTAAAACCACCTGAGTGCCATGAAATAGATGTGACAAAATGCAAAAAAGCTTCCACACTACAACTAGCTGTGTTCTATGGTGCACTATACACTCTAGCAGTTGGAACAGGTGGAACCAAGCCCAACATTTCTACCATTGGTGCTGATCAATTTGATGAGTTTGACACAAAAGAGAAAAAACATAAACTCTCATTCTTCAATTGGTGGATGTTTAGCATTTTTATTGGGACCCTTTTTGCAAATTCTATTTTAGTTTACATACAAGATAATGTTGGTTGGACTCTTGGTTATGCACTTCCAACTCTTGGACTTGCAATAGCTATCATCATATTTTTGGTAGGTACACCTTTCTATAGACATAAAGTACCTACAGGGAGTCCTTTCACTAAAATGGCTAAGGTTATAGTGGCTGCTATAAAGAAATGGAATGTTCCTATTCCTAATGACCCTAAAGAACTATATGAGCTTGATTTGGAAGAGTATGCAAAGAAAGGAAATGTTAGAATTGATTCCACTCCTACATTGAGGTTCCTCAACAAGGCATGTGTCAAGTCTAATTCAAGTACTAGTTCATGGGTGTTATGCCCTATCACACATGTAGAAGAGACCAAACAAATGCTAAGAATGATCCCCATTTGGGTTGCTACATTTATCCCAAGTACAATGATTGCTCAAATAAATACCCTTTTTGTGAAACAAGGAACTACACTTGATAGAGGCATTGGAAGTTTCCAAATTCCACCAGCAAGTTTAGGTACATTTGTGACTCTATCAATGCTTATAAGTGTTGTACTCTATGATCGTGTCTTTGTGAAGATTATGCAAAAACTTACCAAGAATCCTAGAGGAATTACTCTCCTTCAAAGAATGGGAATAGGAATCATAATCCATATAGTGATTATGGTTGTTGCAACTTTCACTGAAAAATATAGACTTAGTGTAGCAAAAAAACACGGTGTAGTCGAAAACGGAGGATTGGTTCCATTAAGCATATTCATTTTGCTTCCTCAGTTTATACTTATGGGAACAGCTGATGCATTCTTAGAGGTTGCTAAGATTGAATTCTTCTATGATCAAGCACCAGAAAGCATGAAGAGTCTTGGAACTTCTTATTCAATGACTAGCTTAGGCATTGGAAATTTCATTAGTACTTTTCTTCTATCAACAGTTTCACATATCACTGAGAAACATGGTCATCAAGGGTGGATTTTGAATAACCTTAATGCTTCTCATCTTGATTACTATTATGCATTTTTGGCTATATTAAACATCTTGAACTTTATATTCTTCTTTATTGTTACAAAGTTTTATGTATATAGAGCTGAAATTTCAGATTCTATAAAAGTCCTTGCAGAAGAATTGAAGGAGAAAACAAGTGTTGTGTCACACCAAGTGATTCCAAGAGACTAG 1785 0.3653 MEDGRVVSDELTQDGSVNLKGKPILKSKTGCWKACSFFVVYEVFERMAYYGISSNLILYLIKKLHQGTVTSSTNVTNWVGTIWITPILGAYVADAYLGRYWTFVTASVIYLLGMSMLTLSVSLPSLKPPECHEIDVTKCKKASTLQLAVFYGALYTLAVGTGGTKPNISTIGADQFDEFDTKEKKHKLSFFNWWMFSIFIGTLFANSILVYIQDNVGWTLGYALPTLGLAIAIIIFLVGTPFYRHKVPTGSPFTKMAKVIVAAIKKWNVPIPNDPKELYELDLEEYAKKGNVRIDSTPTLRFLNKACVKSNSSTSSWVLCPITHVEETKQMLRMIPIWVATFIPSTMIAQINTLFVKQGTTLDRGIGSFQIPPASLGTFVTLSMLISVVLYDRVFVKIMQKLTKNPRGITLLQRMGIGIIIHIVIMVVATFTEKYRLSVAKKHGVVENGGLVPLSIFILLPQFILMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTSLGIGNFISTFLLSTVSHITEKHGHQGWILNNLNASHLDYYYAFLAILNILNFIFFFIVTKFYVYRAEISDSIKVLAEELKEKTSVVSHQVIPRD* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2682 594 CDD MFS_NPF5 32 564 IPR044739 GO:0042937|GO:0042938|GO:0071916
Tpr1g2682 594 Gene3D MFS general substrate transporter like domains 5 570 IPR036259 -
Tpr1g2682 594 Pfam POT family 100 528 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tpr1g2682 594 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 15 574 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tpr1g2682 594 SUPERFAMILY MFS general substrate transporter 27 560 IPR036259 -
Tpr1g2682 594 PANTHER PEPTIDE TRANSPORTER 15 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2682 Tpr-Chr1 30818310 30825047 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2682 7 578 Organic Solute Cotransporters AT5G46040 66.028 0.0 761
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2682 - - gmx:100813385 992.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3338 6 36013943 36017233 Tpr1g2682 1 30818310 30825047 PCT