Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3337 ATGATGGAAGTGGTTGATGAAAAAGGGCAAGATGATTACACTCAAGATGGCACAGTAAATCTACAAGGTAAACCTGTTTTAAGATCAAAGACAGGAAGATGGAAAGCTTGTTCTTTCATAATAGTGTATGAAGTGTTTGAGAGGATGGCTTATTTCGGGATAGCATCAAATTTAGTGGTGTATTTGACAAATAAGCTTCATGAAGGTACTGTGGAATCTTCAAACAACGTTAACAATTGGTCGGGTTCAATTTGGATGATGCCACTTGTAGGAGCTTACGTAGCCGATGCATATCTTGGTCGATATTGGACTTTTGTAATTTCATCCTGCATTTATCTATTGGGGATGTGTTTGTTGACTCTAGCAGTTTCACTACCATCACTTAGTCCACCACAATGTGCCCAAGGTATCCTAGACCAGGATTGCCCTAAGGCATCACCATTGCAAAAGGGTATCTTCTTCTTTGCACTGTACATCATTTCTATAGGCACCGGTGGAACCAAGGCCAACATTTCTACACTAGGAGCAGACCAATTTGACGAGTTTGATGCCAAAGAGCGATCCTATAAGCTCTCTTTTTTCAATTGGTGGTTTTTCAGCATTTTCACCGGTGTCCTTTTCGCCAGCACTTTCGTGGTTTACATACAAGACAATGTCGGTTGGGCCCTTGGATATGCTCTTCCAACCATTGGTCTCACTATTTCAATATTAATGTTTTTGGTAGGAACACCATTTTATAGGCACAAATTTCCCTCAGGCAGCCCTATAACAAGGATGCTTCAAGTCTATGTAGCTGCTTTGAGAAAATGGAAGGCATGTGTTCCAGAAGATCCAAAAGATCTACATGAGCTAAGTATGGAAGAGTACACATGTAACATTAGAAACAAAATTGATCACACATCTTTCTTGAGATTCCTCGACAAAGCAGCTGTAAAAACTGGCCAAACTTCATCATGGATGCTTTGTACTGTGACGCAGGTCGAGGAAACCAAGCAAATGATAAAAATGATACCTATTTTGATTTTAACAATCATTCCAAGCACAATGGTTATGCAAACATTCACACTCTTCATTAAACAAGGCACCACACTAGATAGAAGAATGGGGCCTCATTTTGAAATCCCACCTGCAAGTCTCACATCATTTATAGTTATCTTCATACTGATAAGCCTTGTAGTCTACGATTGTTCTTTCGTTCCTGTGATCCGATCCTACACAAAGAACCCTAGAGGGATCACACTCTTACAGAGAATAGGAGTTGGCCTTGTGGTTCATGTCATTGTAATGGTAATTGCATGCTTGGTTGAGAGGAAGAGACTCAGTGTTGCAAGAGAAAACAACCTCTTAGGCCCGCACGATACACTCCCTCTTACTATTTTCATTCTATTTCCTCAGTTTGCTTTAGCAGGAGTTGCTGATAGCTTTGTTGAAACTGCTAAGATGGAGTTTTTTTATGATCAAGCACCACAAGGTATGAAAAGTCTTGGAGCAGCCTTTTCCACAACAAGTTTAGGTTTAGGAGGTTTTGCTAGTGCCTACATTCTATCAACTGTCGCTGATATCACCCGAAGACATGGTCACGAAGGTTGGATTTTGAATAATCTAAACATATCTCATTTAGATTATTATTATGCTTCCATGGTAGTACTATGTTTAGTAAACCTCATTTGCTTTGTGGTTGTTGCCAAGTTCTATGTTTATAATGATGTAAGGCAAAACAAACCAAGCTTAAAGATGAACTCTACTCCATCTCAGGACAATTTTACAATAAGCCAAAGCAATCCACAAGAGATTGCCAAGTCCTAG 1806 0.397 MMEVVDEKGQDDYTQDGTVNLQGKPVLRSKTGRWKACSFIIVYEVFERMAYFGIASNLVVYLTNKLHEGTVESSNNVNNWSGSIWMMPLVGAYVADAYLGRYWTFVISSCIYLLGMCLLTLAVSLPSLSPPQCAQGILDQDCPKASPLQKGIFFFALYIISIGTGGTKANISTLGADQFDEFDAKERSYKLSFFNWWFFSIFTGVLFASTFVVYIQDNVGWALGYALPTIGLTISILMFLVGTPFYRHKFPSGSPITRMLQVYVAALRKWKACVPEDPKDLHELSMEEYTCNIRNKIDHTSFLRFLDKAAVKTGQTSSWMLCTVTQVEETKQMIKMIPILILTIIPSTMVMQTFTLFIKQGTTLDRRMGPHFEIPPASLTSFIVIFILISLVVYDCSFVPVIRSYTKNPRGITLLQRIGVGLVVHVIVMVIACLVERKRLSVARENNLLGPHDTLPLTIFILFPQFALAGVADSFVETAKMEFFYDQAPQGMKSLGAAFSTTSLGLGGFASAYILSTVADITRRHGHEGWILNNLNISHLDYYYASMVVLCLVNLICFVVVAKFYVYNDVRQNKPSLKMNSTPSQDNFTISQSNPQEIAKS* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3337 601 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 16 578 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tpr6g3337 601 Pfam POT family 102 531 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tpr6g3337 601 SUPERFAMILY MFS general substrate transporter 25 564 IPR036259 -
Tpr6g3337 601 Gene3D MFS general substrate transporter like domains 5 574 IPR036259 -
Tpr6g3337 601 PANTHER PROTEIN NRT1/ PTR FAMILY 5.2-LIKE 16 578 - -
Tpr6g3337 601 MobiDBLite consensus disorder prediction 581 601 - -
Tpr6g3337 601 CDD MFS_NPF5 34 567 IPR044739 GO:0042937|GO:0042938|GO:0071916
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3337 Tpr-Chr6 36004063 36007044 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3337 5 580 Organic Solute Cotransporters AT5G46040 57.338 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3337 - - gmx:100807002 869.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3337 6 36004063 36007044 Tpr1g2681 1 30806793 30814013 PCT