Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2681 ATGCCCATGAAAGAAGACATGATAGCAATTGATTACACACAAGATGGAAGTATTGATCTTAAAGGAAAATCTGTTCTAAGATCCAAGACAGGTTGTTGGAAAGCTTGCTCATTCCTTGTTGTGTATGGGATATTTGAAAGAATGGCTTACTATGGTATATCATCAAACTTGTTTGTGTATTTGACAAAGAAGCTTCACCAAGGCACTGTCACATCTTCAAACAATGTTACTAATTGGATTGGCACCATTTTCATTACTCCCATTTTAGGAGCTTATATTGCTGATGCTCATCTTGGCCGCTATTGGACTTTTGTCATTTCTGCCTTTATCTATTTATTGGGTATGTGTCTACTTACATTATCTGTTTCCCTACCAAGCCTAAAGCCACCTGAAGCAAAGGAAGCTTCAACACAACAACTAGTTGTGTTCTATACAGCCCTCTATATCTTAGCAGTAGGAACAGGTGGAACCAAACCCAACATTTCCACCATTGGTGCTGACCAATTTGATGATTTTGACCCTAAAGAAAGAGCACTTAAGCTCTCATTCTTCAATTGGTGGATGTCATATATTGTCATTGGATCATTATTTGCATTCACAGTTATAGTGTATATACAAGATAATGTGAGTTGGACTCTTGGTTATGCTCTTCCAACTATAGGACTTGTAATATCAATCATTACATTCTTGGCTGGCACACCTTTTTATAGACATAAATTGATTAAAGGGAGTCCCTATATTAGGATGGCTAAGGTCATTGTGGCTGCTATAAGAAAATGGGATGTAGTTGTTCCTAATGACCCTAAAGAACTATATGAGCTTAGTTTGGAAGAGTATACAAAGCAAGGGAAATTCAAGATTGATCTCACTCAAACATTCAGGTTTCTTAACAAGGCATGTGTGGACACTGGTTCAAGCACTTCCGATGAGTGGATGCTATGTCCAATAACACAAGTAGAAGAAACCAAACAAATCCTTAGCTTAATCCCCATTTGGGTTGCTACATTTATTCCAAGTGCAATGATTGCTCAAATAAATACCCTATTTGTAAAGCAAGGAACTACTCTTAACAGATCAATTGGCAACTTCAACATTCCTTCATCAAGTTTAGCTGCATTTACAATCTTAACCATGATTATCACTTACATAATCTATGAAAGTTTCATTGTCAAGATTCTACAGAAGTTGACTAAGAACCCTAGAGGGATTACACTCCTTCAAAGGATAAGCATAGGATTCATAATCCACATAGTGATAATGATAGTTGCATGGTTGATTGAAAAGCATAGACTTAGTGTGGCCAAAAAACATGAAGTTCCATCGAGTATTTTCATTCTGCTTCCACAATTTATACTTATGGGAATAGCCGAAGCACTTTTAGAAGGCGCGAAAATCGAGTTTTTTTATGATCAAGCACCAGAAAGCATGAAGAGTCTTGGAACTTCATATTCATTAACTACTACTGGTATTGGTAGTTTTCTCAGCAGTTTTCTTCTATCAATAGTTTCACGTGTTACCGAGAAACATGGTCGCCGAGGATGGATTTTGGATAACCTGAATGATTCTCATCTTGATTACTATTATGCATTTTTGGCTATACTAAATGTATTGAACTTTATCTTCTTTGTGATTGTTTCAAAGCTCTATGTTTATAGAGCTGAAATTTCAAATTCTCTAGAAGTTCTTGAAACAAATCTGACAGAGAAGAAAGAAAACTTCAAGTGA 1725 0.3623 MPMKEDMIAIDYTQDGSIDLKGKSVLRSKTGCWKACSFLVVYGIFERMAYYGISSNLFVYLTKKLHQGTVTSSNNVTNWIGTIFITPILGAYIADAHLGRYWTFVISAFIYLLGMCLLTLSVSLPSLKPPEAKEASTQQLVVFYTALYILAVGTGGTKPNISTIGADQFDDFDPKERALKLSFFNWWMSYIVIGSLFAFTVIVYIQDNVSWTLGYALPTIGLVISIITFLAGTPFYRHKLIKGSPYIRMAKVIVAAIRKWDVVVPNDPKELYELSLEEYTKQGKFKIDLTQTFRFLNKACVDTGSSTSDEWMLCPITQVEETKQILSLIPIWVATFIPSAMIAQINTLFVKQGTTLNRSIGNFNIPSSSLAAFTILTMIITYIIYESFIVKILQKLTKNPRGITLLQRISIGFIIHIVIMIVAWLIEKHRLSVAKKHEVPSSIFILLPQFILMGIAEALLEGAKIEFFYDQAPESMKSLGTSYSLTTTGIGSFLSSFLLSIVSRVTEKHGRRGWILDNLNDSHLDYYYAFLAILNVLNFIFFVIVSKLYVYRAEISNSLEVLETNLTEKKENFK* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2681 574 PANTHER PEPTIDE TRANSPORTER 16 561 - -
Tpr1g2681 574 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 16 561 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tpr1g2681 574 SUPERFAMILY MFS general substrate transporter 31 547 IPR036259 -
Tpr1g2681 574 Coils Coil 552 572 - -
Tpr1g2681 574 Pfam POT family 101 515 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tpr1g2681 574 Gene3D MFS general substrate transporter like domains 6 557 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2681 Tpr-Chr1 30806793 30814013 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2681 3 572 Organic Solute Cotransporters AT5G46040 58.092 0.0 661
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2681 - - mtr:MTR_1g041885 904.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3337 6 36004063 36007044 Tpr1g2681 1 30806793 30814013 PCT