Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3322 ATGTCCAGTGACAATAAGATGAAGGGTCTCCTTAAAGGTCTGAGAATCCTTTCTCAGATATTTGATGAAAAAGAACAAGAAATTGAGATTGGTAATCCCACGGATGTAAAGCATGTGGCACATATTGGATGGGATGGTCCTACTGAAAATAATAATCCCAGCTGGATGAACGAGTTTAAATCTACCTCAGAACGATCATCAGGACCTTTAAATATGAATGGAGACAATCATTCTAAAGAACTTGATGATTGGGCCTCCTGTGATTCAATGGAAAGAAGTTCAAAGTCGATGAATGATCCAGATGATACACATGAGTTGCCCTTACCTAAATCATCTAAGCAAAAATCTCATTCAGGAAACATGAGAGAGTCACATGCAAAGGAAAAATCAGACAAACCAAGGCAACCAAAAAAGCATTCCAAACATTCAACACCAAATGATTCATTCAATGAATCCAAACACAAAACAACAGAACAACCTATACAAAAAGATACAAACTCCCTCCAAATCCAAGGGAATACTAATGATAATTTACCACCTAGGGTCCAATCAGACAATCCTAAAACGACTCATTCTAAGAAAACAAAAGATGTTCAAGGTGTTAGTGGATCATCTAAATCAAGATCAAAAGCACAAGTTAAGGAATCTAATTCCAATGAAGTTACACATTCTAGATCCAGTTCCAAATCCAAGGAATCTAATTCTAATGAAGGTACACATTCTAGATCAAGTTCCAAATCTAAAGAGTCCAATTCTAATGAAGGGGCACATTCTAGACATAGTTCCAAATCTAAGGACCCAAACTCGAACGATGGATCTCATGCAAGAACGAGTTCTAAATCTAAAGACTCGAACTCCAAAGAAGGACCTCATTCTAGGTCAAGTACCAAATCTAAGGACTCGAACTCGAATGAAGGAGATCTTTCTAGACCAAATTCCAAACCTAGGAATAAACATAGACTCAGTGAAGAAGGTGGACAACTTAAAGAGAGGATCCAATGA 1002 0.3733 MSSDNKMKGLLKGLRILSQIFDEKEQEIEIGNPTDVKHVAHIGWDGPTENNNPSWMNEFKSTSERSSGPLNMNGDNHSKELDDWASCDSMERSSKSMNDPDDTHELPLPKSSKQKSHSGNMRESHAKEKSDKPRQPKKHSKHSTPNDSFNESKHKTTEQPIQKDTNSLQIQGNTNDNLPPRVQSDNPKTTHSKKTKDVQGVSGSSKSRSKAQVKESNSNEVTHSRSSSKSKESNSNEGTHSRSSSKSKESNSNEGAHSRHSSKSKDPNSNDGSHARTSSKSKDSNSKEGPHSRSSTKSKDSNSNEGDLSRPNSKPRNKHRLSEEGGQLKERIQ* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3322 333 MobiDBLite consensus disorder prediction 196 251 - -
Tpr6g3322 333 MobiDBLite consensus disorder prediction 311 333 - -
Tpr6g3322 333 SMART PBD_5 30 62 IPR000095 -
Tpr6g3322 333 Pfam P21-Rho-binding domain 29 62 IPR000095 -
Tpr6g3322 333 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC7-LIKE ISOFORM X1 7 218 - -
Tpr6g3322 333 MobiDBLite consensus disorder prediction 252 304 - -
Tpr6g3322 333 MobiDBLite consensus disorder prediction 44 333 - -
Tpr6g3322 333 Gene3D CRIB domain 23 67 IPR036936 -
Tpr6g3322 333 CDD CRIB 28 61 - -
Tpr6g3322 333 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC8 7 218 IPR044510 -
Tpr6g3322 333 MobiDBLite consensus disorder prediction 161 186 - -
Tpr6g3322 333 MobiDBLite consensus disorder prediction 140 160 - -
Tpr6g3322 333 ProSiteProfiles CRIB domain profile. 30 43 IPR000095 -
Tpr6g3322 333 MobiDBLite consensus disorder prediction 76 133 - -
Tpr6g3322 333 MobiDBLite consensus disorder prediction 47 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3322 Tpr-Chr6 35832553 35835216 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3322 - - mtr:MTR_7g097180 355.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3322 6 35832553 35835216 Tpr1g4024 1 45313456 45316174 PCT