Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4024 ATGTCCAACAAGAAGGTGAAGGGCCTTCTTAAAGGCCTTAGATACATATCTCAAATATTTGAAAGTGAAAAAGAGCAAGAAATACAGATTGGATGTCCTACGGATGTAAAGCATGTGGCCCATATAGGATGGGATGGCCCCTCTGTAAATTCTCCCAGCTGGATGAATGAATTTAAAACAGCTCCAGGATTTGCATCAGCACCCATGACTCTTACAGGTGATACTCAAAGCAAAGCACAAGATAACAACGTAAAATGGGTCTCTGAAGATACAAAGAGAAGAAGTTCAAGGAGTGTGACCCAAGGAAGAGATTTGCCTGAATTGCCAAAATCATCTAGAAGGCAAACAAATACAATAGATTCTCCCACAAGGGGAAAGACAAGACAATCAAGAAAAACATCATCTAACAGACCATCAAACCTTAAAGATTCTCCAGATGAATCCAAACAAGAACTCATCATGTCTAACGATTCTGGAGAATTATTATTAGATGGGGGGTCACAGGCCCAAAACATTCCTAGAAAGACTCGTCGAAAGAAGTCAAAAGATAAAGACAGTTCAAGTGGTAGTAGTTATGTGTCATCATCATCCAAATTGGGATCTAAAACTCAACAACCATCAGATCCAAATTTGGATTGCGATGATTCTACTCCAACTTCCAAGTCTAGTAACAAACCAAGTTCCTTTGAAGAAAATGAGAATTGTGAAAGAGGAATGACTGGTGTGGTATCTTGA 735 0.3918 MSNKKVKGLLKGLRYISQIFESEKEQEIQIGCPTDVKHVAHIGWDGPSVNSPSWMNEFKTAPGFASAPMTLTGDTQSKAQDNNVKWVSEDTKRRSSRSVTQGRDLPELPKSSRRQTNTIDSPTRGKTRQSRKTSSNRPSNLKDSPDESKQELIMSNDSGELLLDGGSQAQNIPRKTRRKKSKDKDSSSGSSYVSSSSKLGSKTQQPSDPNLDCDDSTPTSKSSNKPSSFEENENCERGMTGVVS* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4024 244 MobiDBLite consensus disorder prediction 111 141 - -
Tpr1g4024 244 MobiDBLite consensus disorder prediction 187 229 - -
Tpr1g4024 244 Gene3D CRIB domain 23 70 IPR036936 -
Tpr1g4024 244 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC8 6 200 IPR044510 -
Tpr1g4024 244 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC7-LIKE ISOFORM X1 6 200 - -
Tpr1g4024 244 SMART PBD_5 30 61 IPR000095 -
Tpr1g4024 244 CDD CRIB 28 61 - -
Tpr1g4024 244 MobiDBLite consensus disorder prediction 66 244 - -
Tpr1g4024 244 MobiDBLite consensus disorder prediction 85 100 - -
Tpr1g4024 244 MobiDBLite consensus disorder prediction 69 84 - -
Tpr1g4024 244 MobiDBLite consensus disorder prediction 151 172 - -
Tpr1g4024 244 ProSiteProfiles CRIB domain profile. 30 43 IPR000095 -
Tpr1g4024 244 Pfam P21-Rho-binding domain 29 70 IPR000095 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g4024 Tpr-Chr1 45313456 45316174 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4024 - - cam:101503176 280.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3322 6 35832553 35835216 Tpr1g4024 1 45313456 45316174 PCT