Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3310 ATGGATTCTATTCAAGAATTCATACAGACATGTAACAATGAAAACACTTGCAACTTCTTGAATAACAACTCTATAAGCACCACCAACACAACAAGCTTAACAACAACAGCTACTGGAAGCTCTTCTTCATCTGCAGTTTCAACCATAACCAACACACCAAACAGTAGTAGCCGGTATGAGAACCAGAAACGCCGCGACTGGAACACTTTTGGTCAGTATCTCAAGAATCATCGTCCTCCTCTTTCCCTCTCTCGGTGCAGCGGTGCACATGTCCTAGAATTTCTCAGATATTTGGATCAATTTGGGAAAACAAAAGTACACACACCAATTTGTCCATTTTATGGGCACCCAAATCCACCAGCACCATGTCCATGTCCTCTAAGACAAGCATGGGGAAGTCTTGATGCACTCATAGGCCGTCTTCGCGCCGCCTTTGAAGAAAACGGAGGAAAACCAGAAACAAACCCATTTGGTGCTCGAGCTGTGAGGCTCTACCTTCGCGAAGTTCGCGATCTTCAATCCAAAGCAAGAGGGATTAGTTATGAGAAAAAGAAAAGAAAGCGTCCGCCACCACAACAACCACTTCCATCATCACAAGGTGCAAGTGCAACTCATTAG 618 0.445 MDSIQEFIQTCNNENTCNFLNNNSISTTNTTSLTTTATGSSSSSAVSTITNTPNSSSRYENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPETNPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPPPQQPLPSSQGASATH* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3310 205 Pfam ALOG domain 49 171 IPR006936 -
Tpr6g3310 205 MobiDBLite consensus disorder prediction 33 62 - -
Tpr6g3310 205 PANTHER G1-LIKE PROTEIN 1 199 - -
Tpr6g3310 205 ProSiteProfiles ALOG domain profile. 58 185 IPR006936 -
Tpr6g3310 205 PANTHER PROTEIN G1-LIKE2 1 199 IPR040222 -
Tpr6g3310 205 MobiDBLite consensus disorder prediction 33 58 - -
Tpr6g3310 205 MobiDBLite consensus disorder prediction 176 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3310 Tpr-Chr6 35677478 35679572 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3310 - - ccaj:109797167 287.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3310 6 35677478 35679572 Tpr6g3310 6 35677478 35679572 ECH
Tpr6g3310 6 35677478 35679572 Tpr1g2147 1 22629983 22631846 ECH
Tpr6g3310 6 35677478 35679572 Tpr1g2674 1 30725974 30728224 PCT
Tpr1g2147 1 22629983 22631846 Tpr6g3310 6 35677478 35679572 PCT