Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2147 ATGGATTCATCAATTCAAGATTTTATGGACTCATGTAACTCTGACAACAGTTGTAGCCTCACAACAAACAGCACCATCACTACCAACAACAACATCAGCAACAGTTTAGTTGGTAGCTCTTCACCTTCTGGTTCTACCACCACAAGCAGCCGCTATGAAAACCAGAAACGCCGTGACTGGAACACTTTTGGACAGTATCTCAAGAATCACCGCCCTCCTCTCTCCCTCTCCAGATGTAGCGGTGCTCATGTTCTTGAATTTCTCCGGTACTTGGATCAATTTGGAAAGACAAAAGTTCACACACCAATTTGTCCATTCTATGGACACCCAAACCCACCAGCACCATGTCCATGTCCATTAAGACAAGCTTGGGGTAGTCTTGATGCTCTCATAGGTCGTTTAAGGGCAGCTTTTGAAGAAAATGGAGGAAAACCAGATACAAATCCATTTGGTGCTAGAGCTGTTAGACTTTACCTTCGCGAGGTTCGTGATCTTCAATCGAAAGCAAGAGGTATTAGTTATGAGAAGAAGAAGAGAAAGCGTCCACCCCCACAACAACAACAACAACAACAACAGCATCATCAACAATTACCAATGCAATTGCCTCTTCATCTTCATCATCACCACCAACATCAGCTTCCACCTCCAGGTGCAACTCAATAA 663 0.4389 MDSSIQDFMDSCNSDNSCSLTTNSTITTNNNISNSLVGSSSPSGSTTTSSRYENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPDTNPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPPPQQQQQQQQHHQQLPMQLPLHLHHHHQHQLPPPGATQ* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2147 220 MobiDBLite consensus disorder prediction 33 51 - -
Tpr1g2147 220 ProSiteProfiles ALOG domain profile. 51 178 IPR006936 -
Tpr1g2147 220 MobiDBLite consensus disorder prediction 184 198 - -
Tpr1g2147 220 PANTHER G1-LIKE PROTEIN 4 220 - -
Tpr1g2147 220 Pfam ALOG domain 45 164 IPR006936 -
Tpr1g2147 220 MobiDBLite consensus disorder prediction 33 55 - -
Tpr1g2147 220 PANTHER PROTEIN G1-LIKE2 4 220 IPR040222 -
Tpr1g2147 220 MobiDBLite consensus disorder prediction 169 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2147 Tpr-Chr1 22629983 22631846 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2147 - - gmx:100803605 306.219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g2147 1 22629983 22631846 Tpr1g2147 1 22629983 22631846 ECH
Tpr6g3310 6 35677478 35679572 Tpr1g2147 1 22629983 22631846 ECH
Tpr1g2147 1 22629983 22631846 Tpr6g3310 6 35677478 35679572 PCT