Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2759 ATGGTTCTTCTAGGTTTAATGCAGTTCTCTGTTTTGTCACTCTGTTTCTTAGTCTTAACAACTTTTCCTTATCAAGTTTCAAGCCGTGGCATCTTTGGAAGAAAACCAAATGGTGCTTACCCTTCTTTGGATGATGGAATATGTGCTACTTCTGTCATTGTTCATGGATACAAATGCCAAGAACTTCAGGTTACAACTCAAGATGGGTACATTCTAAGCTTGCAAAGGATCCCAGAAGGTAGAGGTAAAGGTAGTAATGGTGGGACTAGGAAACAACCGGTGCTTTTACAACATGGAGTATTAGTGGATGGTATGACATGGCTTATGAACTCTCCAGAACAAGACTTGCCTCTAATTCTTGCAGATAATGGCTATGATGTTTGGATTGCTAACACAAGAGGAACCAGACATAGTCGCCGACATGTCTCATTGGACCCCTCTAACCCGGCCTTTTGGAAATGGTCTTGGGACGAACTTGTTACATATGATCTACCTGCTGTGTTTGATTATGTGTACAGCCAAACAGGGCAGAAGATTAATTACGTTGGTCATTCTCTGGGGACTTTGATTGCTTTAGCTTCTTTCTCCGAAGGAAAATTGGTTAACCAGCTTAAATCAGCGGCGTTATTGAGTCCCATTGCCTATCTGAGCCACATGAACACCGCACTTGGTGTTATTGCAGCTAAGTCCTTTATTGGCGAGATAACTACAATACTTGGTCTAGCTGAATTTAATCCCAAAAGTTTACCGGTTGATGGTTTTCTCAAGTCTCTATGTGCTAACCCTGGAGTTGACTGCTTTGATTTGTTGACTGAATTAACTGGTAAAAATTGTTGTCTCAATTCTTCAACTGTTGATCGATTCTTAATGAATGAACCTCAATCAACATCAACAAAGAATATGGTGCACTTGGCTCAAATTGTTAGACATGGAGTTCTAGCAAAATTCAATTATGTAAGACCAGATTATAACATTATGCATTATGGAGAAATATTTCCACCAATATATAACCTATCAAATATTCCACATGATTTACCTCTCTTCATTAGCTATGGAGGACAAGATGCACTTTCAGATGTTCGTGATGTTGAGAATTTACTTGATAAACTTAAGTTTCATGATGTGGATAAGAGAAGTATTCAATTTGTGAAAGACTATGCTCATGCTGATTATATTATGGGGTTTAATGCTAAGGACATAGTTTATAATTCTGTTCTTTCATTTTTCAATGGTCAAATCAATACTTGA 1248 0.3806 MVLLGLMQFSVLSLCFLVLTTFPYQVSSRGIFGRKPNGAYPSLDDGICATSVIVHGYKCQELQVTTQDGYILSLQRIPEGRGKGSNGGTRKQPVLLQHGVLVDGMTWLMNSPEQDLPLILADNGYDVWIANTRGTRHSRRHVSLDPSNPAFWKWSWDELVTYDLPAVFDYVYSQTGQKINYVGHSLGTLIALASFSEGKLVNQLKSAALLSPIAYLSHMNTALGVIAAKSFIGEITTILGLAEFNPKSLPVDGFLKSLCANPGVDCFDLLTELTGKNCCLNSSTVDRFLMNEPQSTSTKNMVHLAQIVRHGVLAKFNYVRPDYNIMHYGEIFPPIYNLSNIPHDLPLFISYGGQDALSDVRDVENLLDKLKFHDVDKRSIQFVKDYAHADYIMGFNAKDIVYNSVLSFFNGQINT* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2759 415 SUPERFAMILY alpha/beta-Hydrolases 55 410 IPR029058 -
Tpr6g2759 415 PANTHER LYSOSOMAL ACID LIPASE-RELATED 13 411 - -
Tpr6g2759 415 Pfam Partial alpha/beta-hydrolase lipase region 53 110 IPR006693 GO:0006629
Tpr6g2759 415 Pfam alpha/beta hydrolase fold 113 229 IPR000073 -
Tpr6g2759 415 Gene3D alpha/beta hydrolase 46 411 IPR029058 -
Tpr6g2759 415 PANTHER TRIACYLGLYCEROL LIPASE 2 13 411 - -
Tpr6g2759 415 PIRSF Steryl_ester_lip 6 414 IPR025483 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2759 Tpr-Chr6 30099766 30104468 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2759 45 415 Acyl Lipid Metabolism Gene Families AT2G15230 38.770 7.39e-94 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2759 K01052 - gmx:100779460 699.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g2759 6 30099766 30104468 Tpr5g0349 5 5262315 5266500 PCT