Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0349 ATGGCTTTCCTGGGTTTGATGACAAATTTTGCTGCTTTGACCTTTTGTGTCTTAGTCTTAGTAACTCATAATTATCAAGCCCAGGCTTCGACTCTTGTTGGTAAGAAAAATATTCAATCTTCTTCAAACGGTTTATGTGCTTCTTCCGTCACTATCCATGGCTACAAATGCCAAGAATATGAAGTTACAACTGGAGCTGGATATATTCTTAGTGTTCAAAGGATTCCAGAAGGTCGATCTCAAGTTAGTGGCAATGTTACTAAGAAGGAACCAGTGGTTGTACAACATGGGGTTTTAGTGGATGGATCAACATGGTTTATGAACAGTCCAGAGCAAAACCTGCCTATGATTCTTGCTGATAATGGCTTTGATGTGTGGGTTGTTAATACAAGAGGAACCAAATTTAGCCGCAAACACACTTCCCTAGACACCTCGAACGAGGGATATTGGGCTTGGTCTTGGGATGAATTGGTTACTGATGAAATGCCAGCTATTTTTGATTTTGTCTCCAAAAATACAGGGGGACAGAAAATAAATTATGTTGGCCATTCTTTGGGGACTTTGGTAGCTTTGGCATCAATGGCAGAGGGTAGATGGACAAAAGATAATGTGAAGTCAGTAGCATTGTTGAGTCCTATTGCCTATTTGACTAGAATGACAACTCCAATAGGAGCTATTGCTGCAAGAACCTTACTCGCCGAGGGCTATACTTTTCTGGGCATTCCTGAATTTGATCTCAAAGCGTATCCTATTCTTGAATTCTTTAAGGGTGTTTGTGCTAATCCTGGAGTAAACTGTGATGACTTGTTTACCGCAGCAACAGGTGAAAATTGTTGCTTACAACAATCAACTTTTAATCAATTCATGGAGGTTGAACCACAATCATCTTCAACAAGGAACATGTTTCATTTAGCTCAGACCGTTCGAAGTGATACCTTGACGAAATTTGACTTTTTTAGACCAGACTTGAACATGTTGCATTATGGACAACTATTTCCTCCCGAATACGACCTCACAAAAATTCCTAAAGACATTCCAATTTTCATGAGCTATGGTGGTAAAGACGCGCTTTCTGATGTCGCCGATGTTAAAAAATTACTCAGATATTTTGAGAACCATGATGCAAACAAGCTTAGTGTTCAGTTCATTGCTAACTATGCTCATGCTGATTACATGATGGCTTATAATGCCAAAGACTTAGTGTACAACAATGTTACATCATTTTTCAAGCGTCAATGGTGA 1242 0.3929 MAFLGLMTNFAALTFCVLVLVTHNYQAQASTLVGKKNIQSSSNGLCASSVTIHGYKCQEYEVTTGAGYILSVQRIPEGRSQVSGNVTKKEPVVVQHGVLVDGSTWFMNSPEQNLPMILADNGFDVWVVNTRGTKFSRKHTSLDTSNEGYWAWSWDELVTDEMPAIFDFVSKNTGGQKINYVGHSLGTLVALASMAEGRWTKDNVKSVALLSPIAYLTRMTTPIGAIAARTLLAEGYTFLGIPEFDLKAYPILEFFKGVCANPGVNCDDLFTAATGENCCLQQSTFNQFMEVEPQSSSTRNMFHLAQTVRSDTLTKFDFFRPDLNMLHYGQLFPPEYDLTKIPKDIPIFMSYGGKDALSDVADVKKLLRYFENHDANKLSVQFIANYAHADYMMAYNAKDLVYNNVTSFFKRQW* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0349 413 PANTHER LYSOSOMAL ACID LIPASE-RELATED 11 412 - -
Tpr5g0349 413 Pfam Partial alpha/beta-hydrolase lipase region 50 108 IPR006693 GO:0006629
Tpr5g0349 413 Gene3D alpha/beta hydrolase 34 411 IPR029058 -
Tpr5g0349 413 PIRSF Steryl_ester_lip 6 413 IPR025483 GO:0016788
Tpr5g0349 413 SUPERFAMILY alpha/beta-Hydrolases 51 410 IPR029058 -
Tpr5g0349 413 Pfam Serine aminopeptidase, S33 116 229 IPR022742 -
Tpr5g0349 413 PANTHER TRIACYLGLYCEROL LIPASE 2 11 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0349 Tpr-Chr5 5262315 5266500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0349 40 412 Acyl Lipid Metabolism Gene Families AT2G15230 32.800 2.86e-78 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0349 - K01052 cam:101503018 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0349 5 5262315 5266500 Tpr5g0349 5 5262315 5266500 ECH
Tpr6g2759 6 30099766 30104468 Tpr5g0349 5 5262315 5266500 PCT