Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2741 ATGAAAGGAAAAAGTCGGAGAAGTGGCGGCACGGTTCAATTGGATTACTTGATTCACATACAGGAGCTTAAGCCTTGGCCTCCGTCGCAATCTCTCAAATCCATTCGATCTGTATTGATACAATGGGAGAATGGCGAACGCTCTTCTGGGTCAACTAAACCTGTTTCCCCTTCAACTGGTGAAGGAAAAATGGAGTTTAATGAGTCATTTAGGCTTTCTGTGACATTGGTTAAGGACATGTCTGTTAAAAGTTCCGATGCTGAAGTTTTCCAAAAGAATACTTTGGAGTTTAACTTGTATGAGCCTAGAAGAGATAAGATTGCTAAGGGTCAGTTGCTTGGGACGGCCATTGTAGACTTGGCGGATTGTGGCATAATTAGAGAGACTTTAAGTATTAGTGTTCCATTGAATTGCAAGAGGAACTACAGAAACACGGATCAGCCACTTTTATTCGTTAAAATCGAGCCTGTTGAAAAGAATCGCAGTAAGTCCACGTTGAAGGACAGTTTGTTGAAGGAGAATTCCAGCAGCGGTGATTCTGTATCGGCATTGATGAACGGTGAATATGCTGAGGAAGCTGAAATTGCCTCTATTACTGATGATGATGTTTCCTCTCATTCATCTGTGGCTGCAGTTATAAATTCACCCGAATCGAGTGCGTACATGCCTCCTGATCGTGAAGAGAATGGAACAGCTCAAAAAAATGGTAGAAAGGACAATGAACACCACTTGGTTTCAGAAACAAGTGTTGATAAATTGAATATGAGGCAACAGGATATGCATGTGAAACCCGAGAGGAGTCCAATAAATGGTCATAATTCTATGGAAAATACTCCCAGTCATGGTTTAGAGACAACCCAAAAGCAAGTTGTTTCTCCTAGTGCCGATTACTCTCCCATATCCTTGGAGGAAAAGTCTATGAGCAGCTCCAGAAGCAGTGATCAAGAAAATTTAGATCAGAAGATTCATGAAAAAGCTGCTAATGATATAAACGCAATAACAAATGTTCAAACAAACAATAACGAAGGTTCTTATTCAAGCAACACTGCTTCTCTAGATAGTAATGGCTTCATGAGCAAGAATCCAGGCTCAGTAAACTGTGATGGTTTGGAAATCGAGGACAAATTAAATGAGCAATGTGAGGAATCCGGAAAATATTGTGTGAAGGAAGGAGGAAGCGATGAATATTACTATAATTCCGTTGAGGACAAGCTTGGAAAAAGCGAAAGGTCGAAGTATGTAAAGTCTGTAAGATCATCAGGAGACTTGGCTAGGAGTGGATCACTTGGTAGCAATTATCATGCTGAGGTAAAAGAAAACGGCATTAATGGAGATGCTCAAAACAATGGAGGGAACATCAGAAGCAGTGAAAGAAAAGACAGTAAGATTTATCCAAAGGACGTCAGAAATAGCATTTCAGGCGGCAAGATTGAGCAGTTGGAAAACAAGATAAAGATGCTTGAAGGAGAGTTAAGAGAAGCGGCTTCAATTGAGGCTGCTTTATATTCCGTAGCTGCTGAGCATGGAAGCTCCATGAGTAAGGTTCATGCCCCAGCTCGACGACTTTCCAGGCTGTACCTTCATGCTTGTAAAGAAAATATTCCTGCAAGAAGGTCTGGCGCAGCTAAAAGTGCTGTTTCAGGATTAGTACTTGTTGCAAAGGCATGTGGAAATGATGTACCAAGGTTGACTTTTTGGTTGTCAAATTCTATTGTTTTGAGAACAATTATAAGCCAAACAAGAAAGGATGGGGCACCATCAAATCCTTCTGGAACTGGTGCAAGAAGGAAGAGTGGAGAAGGGAATGGCAAGATAGTACAACCATTAGTATGGAAGGGGTTCTCTCCTAAGAAAACCGAAAATATTGCAGTGGAATATGGAGGTTTTGTTAACTGGGATGACTCAAACGTGTTCACTTCGGCACTGGAAAAGGTTGAAACTTGGATCTTCTCTCGCATTGTTGAATCTATATGGTGGCAGTCTCTGACTCCACATATGCAGCTTGTTGATGCAAAGATTACTCATAAGGATGTTGGTTCTGCCTCAAGTAAAAGCTTTACGAAGACATTGAGCTCATCAAGCTCACATGATCAAGAGATGGGAGATTTATCACTTGATATTTGGAAGAAGGCTTTTAGAGAAGCTTGTGAAAGAATCTGTCCAGTCCGAGCTGGGGGGCATGAGTGTGGCTGTCTGTCTGTGCTGCCTACATTGATAATGGAGCAGTGCATAGCCAGATTAGATGTTGCTATGTTCAATGCCATTCTTCGCGAATCTGTTGATGACATTCCATCTGATCCTATATCTGATCCAATTAGTGATCCCAAGGTTCTCCCCATTCCACCTGGTAAATCAAGCTTTGGAACCGGTGCTCAGCTCAAAACTGCGGTTGGTAACTGGTCTAGATGGCTGACTGACCTATTTGATATGGATGATGACGACTCGCTTAAGGATAAAGATAATGATGACATTGATAACAATGATGGAATTGCATCCTTCAAGGCCTTCCATTTTCTTAATGCACTCAGTGATCTCTTGATGCTTCCTAAGGATATGCTGTTAAGTGCATCCATCAGAAACGAGGTTTGCCCAATGTTTGGTGCATCAATAATCAAGAAGATTATAGAAAATTTTGTTCCAGACGAGTTTTGCCCTGATCCAATTCCCACTGATGTGTTTGAAGCTCTGGATTCACAGGATGATGTCGAGGAGTCTGTCAACAACTTTCCATGCATTGCTGCTCCCATTGTATATTCACCTCCACAAGCAACAACGATTGCAAAAATTGTTGGGGAGATTGAAATTGAATCTCAGCACAGTCAGCTGAGAAGAAGCAGATCATCTGTTGTTAGGAAGTCACACACCAGTGATGATGAGCTCGAGGAATTAAACTCCCCATTATCTTCAATTTTATTTAGCAATTCATCCCAGCCAGTATCAACAAAACCCAACTTAAAGTGGAAAGAAAGCCGCAATGAGTCTGCTACCAGATATGCACTTCTTAGGAATGTTTGGATGAACAGCGAGTGA 3030 0.4152 MKGKSRRSGGTVQLDYLIHIQELKPWPPSQSLKSIRSVLIQWENGERSSGSTKPVSPSTGEGKMEFNESFRLSVTLVKDMSVKSSDAEVFQKNTLEFNLYEPRRDKIAKGQLLGTAIVDLADCGIIRETLSISVPLNCKRNYRNTDQPLLFVKIEPVEKNRSKSTLKDSLLKENSSSGDSVSALMNGEYAEEAEIASITDDDVSSHSSVAAVINSPESSAYMPPDREENGTAQKNGRKDNEHHLVSETSVDKLNMRQQDMHVKPERSPINGHNSMENTPSHGLETTQKQVVSPSADYSPISLEEKSMSSSRSSDQENLDQKIHEKAANDINAITNVQTNNNEGSYSSNTASLDSNGFMSKNPGSVNCDGLEIEDKLNEQCEESGKYCVKEGGSDEYYYNSVEDKLGKSERSKYVKSVRSSGDLARSGSLGSNYHAEVKENGINGDAQNNGGNIRSSERKDSKIYPKDVRNSISGGKIEQLENKIKMLEGELREAASIEAALYSVAAEHGSSMSKVHAPARRLSRLYLHACKENIPARRSGAAKSAVSGLVLVAKACGNDVPRLTFWLSNSIVLRTIISQTRKDGAPSNPSGTGARRKSGEGNGKIVQPLVWKGFSPKKTENIAVEYGGFVNWDDSNVFTSALEKVETWIFSRIVESIWWQSLTPHMQLVDAKITHKDVGSASSKSFTKTLSSSSSHDQEMGDLSLDIWKKAFREACERICPVRAGGHECGCLSVLPTLIMEQCIARLDVAMFNAILRESVDDIPSDPISDPISDPKVLPIPPGKSSFGTGAQLKTAVGNWSRWLTDLFDMDDDDSLKDKDNDDIDNNDGIASFKAFHFLNALSDLLMLPKDMLLSASIRNEVCPMFGASIIKKIIENFVPDEFCPDPIPTDVFEALDSQDDVEESVNNFPCIAAPIVYSPPQATTIAKIVGEIEIESQHSQLRRSRSSVVRKSHTSDDELEELNSPLSSILFSNSSQPVSTKPNLKWKESRNESATRYALLRNVWMNSE* 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2741 1009 MobiDBLite consensus disorder prediction 300 319 - -
Tpr6g2741 1009 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 14 122 IPR019448 -
Tpr6g2741 1009 MobiDBLite consensus disorder prediction 230 255 - -
Tpr6g2741 1009 MobiDBLite consensus disorder prediction 214 255 - -
Tpr6g2741 1009 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 2 1009 IPR021827 GO:0005643
Tpr6g2741 1009 MobiDBLite consensus disorder prediction 439 465 - -
Tpr6g2741 1009 ProSiteProfiles C2 NT-type domain profile. 4 158 IPR019448 -
Tpr6g2741 1009 MobiDBLite consensus disorder prediction 300 315 - -
Tpr6g2741 1009 PANTHER EEIG1/EHBP1 PROTEIN AMINO-TERMINAL DOMAIN PROTEIN 2 1009 - -
Tpr6g2741 1009 Coils Coil 477 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2741 Tpr-Chr6 29958875 29964955 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2741 - - cam:101491530 1422.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g2741 6 29958875 29964955 Tpr5g0340 5 5141592 5148141 PCT