Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2230 ATGGATCAGATATTGAACAAGGTCGGATCTTACTGGTTCAGCAAGAAAGCCAACAAGGAGCTTAATTCTGTCGGTGATGATATCAACTCACTGTCAAGCAGCATTGAAGGAGGAACCAAATGGCTGGTCAACAAATTAAAAGGAAAGATGCAAAAGCCATTAACAGAGTTGCTGAAGGAGTATGATCTACCAATAGGACTCTTTCCGCGTGATGCAACAAACTATGAATTCAATGAAGAAACAAGAAAGCTTGTTGTTTACATTCCTCAAGTGTGCGAAGTAGGGTACAGAGATTCATCAGTTTTGCGGTTCACGACCAGTGTTTCTGGTTACTTGGAGAAAGGAAAGCTAGTAGACATAGAGGGTATAAAGACCAAAGTGTTGATGTGGGTGAAAGTCACCGCCATTTCATCTGAGGGACCAAAGCTTCACTTCACTGCTGGTATGAAGAAAACAAGGAAAAGGGAAGCTTATGAGGTTTCTAGAGATGGTGTAATTATAGATAAATTCTAA 513 0.4055 MDQILNKVGSYWFSKKANKELNSVGDDINSLSSSIEGGTKWLVNKLKGKMQKPLTELLKEYDLPIGLFPRDATNYEFNEETRKLVVYIPQVCEVGYRDSSVLRFTTSVSGYLEKGKLVDIEGIKTKVLMWVKVTAISSEGPKLHFTAGMKKTRKREAYEVSRDGVIIDKF* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2230 170 Pfam Protein of unknown function, DUF538 55 159 IPR007493 -
Tpr6g2230 170 PANTHER T31J12.3 PROTEIN-RELATED 3 170 IPR007493 -
Tpr6g2230 170 SUPERFAMILY At5g01610-like 2 169 IPR036758 -
Tpr6g2230 170 PANTHER DUF538 FAMILY PROTEIN 3 170 - -
Tpr6g2230 170 Gene3D - 32 170 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2230 Tpr-Chr6 24209785 24213235 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2230 - - gmx:100305947 315.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g2230 6 24209785 24213235 Tpr4g0677 4 6252219 6255821 PCT