Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0677 ATGGATCAAATATTCAACAAAGTTGGAACCTATTGGTTCAACCAGAAAGCCAATAATCAGCTTAATTCCGTCGGTGATGATCTCAATTCAATCTCAGAAAGTATCGAAGGGGGAACCAAATGGTTGGTCAACAAAATAAAAGGAAAGATGCAGAAGCCATTACCAGAGTTGCTAAAGGAGTATGATCTACCAATAGGAATCTTTCCTCGTGATGCAACAAACTACGAATTCAACGAAGAGACAGGAAAGCTTGTAGTCTTCGTTCCTCAAGTCTGTGAAGTAGGCTACAAAGACTCATCAGTCTTGCGTTTCTTCACCACCGTGACCGGTTATATGGAGAAAGGAAAGCTAGCAGACATAGAGGGAATGAAGACGAAAGTTATTATTTGGGTAAAAGTGACAACCATTTTCTCCGAGGGATCGAAGCTCTATGTGACAGCTGGCATGAAGAAAACAAGGAGTAGGGAAGCATATGAGGTTACAAGAGATGGTGTAACTGTAGATAAGTTCTAA 513 0.4074 MDQIFNKVGTYWFNQKANNQLNSVGDDLNSISESIEGGTKWLVNKIKGKMQKPLPELLKEYDLPIGIFPRDATNYEFNEETGKLVVFVPQVCEVGYKDSSVLRFFTTVTGYMEKGKLADIEGMKTKVIIWVKVTTIFSEGSKLYVTAGMKKTRSREAYEVTRDGVTVDKF* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0677 170 Pfam Protein of unknown function, DUF538 56 159 IPR007493 -
Tpr4g0677 170 PANTHER T31J12.3 PROTEIN-RELATED 3 170 IPR007493 -
Tpr4g0677 170 SUPERFAMILY At5g01610-like 2 170 IPR036758 -
Tpr4g0677 170 Gene3D - 32 170 IPR036758 -
Tpr4g0677 170 PANTHER DUF538 FAMILY PROTEIN 3 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0677 Tpr-Chr4 6252219 6255821 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0677 - - gmx:100500143 323.553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0677 4 6252219 6255821 Tpr4g0677 4 6252219 6255821 ECH
Tpr6g2230 6 24209785 24213235 Tpr4g0677 4 6252219 6255821 PCT