Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2201 ATGAAAAAGAAGTGCACAGTGGCTTCCATGGAACATACCGCAGCGAAACCTAGCTCTGTCCGGAACCTTCTAATACGGTTACTTCTCTCCGGCGTATTCATCATCGCTATTCGTTTCGCTTACGTCATCTCCATCGCCGGCGAGTCATGTAACGTCGCCGATTTCTGCTTCTTCTCACTTCCGGAGACATTCAGTCTCGCTATTTCCGGTAATGATCCTATCTCCGTTGACTCAGGTCCCGGCGCCGGCCGTGGTAATTCATCGTTATCGGAGCTTTATTCTAGCAAGGAGTGGCTTGACAGTGTGAGTTTCTACTCGTCGGTTTTTCATGATTTGATCGGCGGCGGTTACCTTTCGCCGGAGTCGAAGTCTCTCTGCGTTGAAACGCCGACCGGACGGGATGTTTTCGCTCTGAGGGAAATCGGCGTCAAAAACGCCATCGGAATCTCGAAGAAATCAGTAAAGCCGCTTGTGAAATCAGGAACCGGTGAGCGGATTCCGTTCGGTGACGGTTACTTTGATTTTGTGTTTTCCGGTGAAGGCTCGTTCGCGAGGTCGGCGAAGCCGGCTGTTTTCGCAGCAGAGATTGCTCGGACGCTGAAACCGGAAGGATTTGCGGTATTTCATTTCACAAACCCTAAAGATACTTATAGTTTCAATTCATTCCTTGATTTGTTTCATTGTTTCAAAGTAGTGAAATTGCATGTTTTAGAAGGGTTTGATTCTTCAATGCCTTATATACATGAAACTGTATTGAAAAATGAGTGTGTTGATTATGGTTCTGGTAAATTTGACAGTGATTATTATTCACATTCAAATGGAAATTGTTATGTTCCTGGTTATAAGAAAGATTTGATTAGGATTGCTGAGCCTTTGATTGAAACGGAACCGTTGAAACCATGGATTACATTGAAAAGGAATATAATGAACATAAAGTATCTTTCTTCAATGGTTGATATAAGTTTCAAAAATAGGTATTTGTATGTTGATGTTGGAGCTAGAAGCTATGGTTCTAGTATAGGATCTTGGTTTAGGAAACAGTATCCTAAACAGAACAAGACATTTCATGTGTATGCTATTGAAGCTGATAAGACTTTCCATAAGGAGTATGGGATGAAGAAAGGGCTTACTTTGATTCCTTATGCTGCTTGGGTGAAGAATGAGACTTTGGCTTTTGAGATTCATCGTGATCCAGGGGAGCATGTGTCAGTTAAAGGAAGAGGAATGGGTAGGATTCAACCTTTGCAGATGACAGGGAAGGAGTTTGATGGGGAGGTGGAGAAGATGCAGGGATTTGATTTTGCTAATTGGTTGAAGAACACGGTTTCAAAGAATGATTTTGTTGTGATGAAAATGGATGTGGAGGGTACTGAATTTGATCTCATTCCGAGGTTGTTTGAAACTGGGGCGATATGTTTGATAGATGAGATTTTCCTTGAATGCCATTACAATAGGTGGCAGAGATGTTGTCCTGGGCAGAGGAGTTCAAAGTATGAGAAAACATATGATCAATGCTTGGAGCTCTTCAATTCTCTTCGACAAAGTGGAATTCTTGTTCATCAATGGTTTTAA 1572 0.4224 MKKKCTVASMEHTAAKPSSVRNLLIRLLLSGVFIIAIRFAYVISIAGESCNVADFCFFSLPETFSLAISGNDPISVDSGPGAGRGNSSLSELYSSKEWLDSVSFYSSVFHDLIGGGYLSPESKSLCVETPTGRDVFALREIGVKNAIGISKKSVKPLVKSGTGERIPFGDGYFDFVFSGEGSFARSAKPAVFAAEIARTLKPEGFAVFHFTNPKDTYSFNSFLDLFHCFKVVKLHVLEGFDSSMPYIHETVLKNECVDYGSGKFDSDYYSHSNGNCYVPGYKKDLIRIAEPLIETEPLKPWITLKRNIMNIKYLSSMVDISFKNRYLYVDVGARSYGSSIGSWFRKQYPKQNKTFHVYAIEADKTFHKEYGMKKGLTLIPYAAWVKNETLAFEIHRDPGEHVSVKGRGMGRIQPLQMTGKEFDGEVEKMQGFDFANWLKNTVSKNDFVVMKMDVEGTEFDLIPRLFETGAICLIDEIFLECHYNRWQRCCPGQRSSKYEKTYDQCLELFNSLRQSGILVHQWF* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2201 523 Coils Coil 523 523 - -
Tpr6g2201 523 Pfam Methyltransferase FkbM domain 330 489 IPR006342 -
Tpr6g2201 523 PANTHER METHYLTRANSFERASE DOMAIN PROTEIN 35 523 - -
Tpr6g2201 523 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 160 237 IPR029063 -
Tpr6g2201 523 Pfam Methyltransferase domain 159 208 IPR013216 GO:0008168
Tpr6g2201 523 Gene3D Vaccinia Virus protein VP39 311 490 IPR029063 -
Tpr6g2201 523 Gene3D Vaccinia Virus protein VP39 140 242 IPR029063 -
Tpr6g2201 523 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 313 481 IPR029063 -
Tpr6g2201 523 PANTHER METHYLTRANSFERASE 35 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2201 Tpr-Chr6 23878054 23880417 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2201 - - gmx:102670512 849.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g2201 6 23878054 23880417 Tpr4g0647 4 6013031 6017121 PCT