Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0647 ATGGAACCTACCGTAGCGAAGCCTGGCTTTCTACGGAATGTTCTGGTACGTTTACTTCTCTTCGGCGTTTTCATCGTCATTATTCGTTTTGCTTACATCATCACTATCGCCGGCGAAACCTGCAACGTCGGAGATTTCTGTTTCTTCTCTTCACCGGAGAAAATTAATGTAGCCGTTACCGGATCTGGTTCCGGTGGCGTCGCCGGTGCCGGTGCACTCGCTGTCCGATCCTCATCCGAACTAGCTTTACCGGTGCATCATGCAAGCAAAGATTGGATCAATGGAGTTCGATTTTACTCTTCCGTTTTCCAGAATTTGATTGTCGCCGGTTATCTTTCACCGGAGGCGAAGTCTTTGTGTGTTGATACGGTTACCGGAAGGGATGTGTTTGCGTTGAAGGAGATCGGTGTTGTTGATTCGGTTGGAATCTCGAAGAAGGCGTTGAAGCCGTTGGTGAAATCCGGTGAAGGTCATAGGATTCCGTTTGGTAATAACACGTTTGATTTTGTGTTTTCCGGTGAAGGTGGATTGGAGAGAACGGTGAAACCGGTTGAATTTGCGAGGGAGATCGCGAGGACGCTGAAACCCGAAGGGTTTGCAGTGTTTCATGTAAAGACTAAAGATTCTTACAGTTACAATTCATTTGTTGATTTGTTTAAATTTTGTTGCAAAGTAGTTAAATTCAATGATATTCAAGGTTTCGATGATTCGATGCCTGAGATAAGAGAAATCGTAGTGAAGAAAATCGGTTATAGAAATATTGATTCTGATATTGAATTGATTGAGAATAAGAAGTGTTCTGTTGCAGGGTATAAGAGAGAATTGGTTAAGAATGCTGAGGAATTGATTGAAGAGGAACCATTGAAACCATGGATAACCCTAAAGAAGAATGTGAAGAATATAAAGTATGCATCTTCAATGGTTGATATAAGCTTTAAGAGTAGATATGTGTATGTTGATGTTGGAGCTAGAAGCTATGGTTCAAGCATTGGAAGCTGGTTTAAGAAACAGTATCCAAAACAGAATAAAACTTTTCATGTTTATGCAATTGAAGCTGATAAAGCTTTTCATGAAGAGTATGTGATGAAAAAAGGGGTGACTTTGTTACCTTATGCTGCATGGGTTAAGAATGAGAGTTTGGTTTTCGAAATTAACAACGACCCGGGTGATAAAAAGACAGAGAAAGTAGGGCGAGGAATGGGAAGGATTCAACCGTTGGATTCTCAGGGTGGTGGTGGCGGCGGTGTTCATAAGATACAAGGGTTTGATTTCGCTGAATGGTTGAAGAGCACGGTTACAATGAACGATTTTGTTGTGATGAAAATGGATGTTGAAGGTACTGAATTTGATTTGATTCCTAGGTTGTTTGAAACCGGTGCGATTTGTTTGGTTGATGAAATTTTTCTTGAGTGTCATTATAATAGATGGCAGAGATGTTGTCCCGGACAAAGAAGTCCTAAGTATGAGAAAACATATGATCAATGTTTGCAGCTTTTCAATTCTCTTAGACAAAGTGGTGTTCTTGTTCATCAATGGTTTTAG 1542 0.4073 MEPTVAKPGFLRNVLVRLLLFGVFIVIIRFAYIITIAGETCNVGDFCFFSSPEKINVAVTGSGSGGVAGAGALAVRSSSELALPVHHASKDWINGVRFYSSVFQNLIVAGYLSPEAKSLCVDTVTGRDVFALKEIGVVDSVGISKKALKPLVKSGEGHRIPFGNNTFDFVFSGEGGLERTVKPVEFAREIARTLKPEGFAVFHVKTKDSYSYNSFVDLFKFCCKVVKFNDIQGFDDSMPEIREIVVKKIGYRNIDSDIELIENKKCSVAGYKRELVKNAEELIEEEPLKPWITLKKNVKNIKYASSMVDISFKSRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFHVYAIEADKAFHEEYVMKKGVTLLPYAAWVKNESLVFEINNDPGDKKTEKVGRGMGRIQPLDSQGGGGGGVHKIQGFDFAEWLKSTVTMNDFVVMKMDVEGTEFDLIPRLFETGAICLVDEIFLECHYNRWQRCCPGQRSPKYEKTYDQCLQLFNSLRQSGVLVHQWF* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0647 513 Gene3D Vaccinia Virus protein VP39 300 474 IPR029063 -
Tpr4g0647 513 PANTHER METHYLTRANSFERASE 1 513 - -
Tpr4g0647 513 Pfam Methyltransferase FkbM domain 320 479 IPR006342 -
Tpr4g0647 513 PANTHER METHYLTRANSFERASE 1 513 - -
Tpr4g0647 513 Pfam Methyltransferase domain 153 202 IPR013216 GO:0008168
Tpr4g0647 513 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 155 213 IPR029063 -
Tpr4g0647 513 Gene3D Vaccinia Virus protein VP39 110 299 IPR029063 -
Tpr4g0647 513 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 302 455 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0647 Tpr-Chr4 6013031 6017121 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0647 - - gmx:121174389 752.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0647 4 6013031 6017121 Tpr4g0647 4 6013031 6017121 ECH
Tpr6g2201 6 23878054 23880417 Tpr4g0647 4 6013031 6017121 PCT