Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2179 ATGCCTATCTCCAGGTACCGTATTCGGAATGCGCATGGTTTAGCGGATCCGGAGCTCATCGGTGCCGCCGATAAGGATGACTCCGAAGCTCTCCTTGAAGCCGTAGCCATGACTGGACTCGTCGGTTTCTTGCGCCAACTCGGTGACCTTGCTCAGTTTGCCGCTGAGTTGTTCCACGACCTGCATGAAGAAGTAATGGCTACTGCTGAAAGAGGCCACAGTCTTATGTCTCGTGTTCAACAGCTTGAGGCTGAAATTCCTCCAATTGAGAAAGCATTTTTGTCACGAACTCATCATTCATCTTTTTTCACAAATGGAGGGATTGACTGGTGTCCTAATCTTCGGTCTGAACAGAATCTCATTACTCGTGGAGATTTACCAAGATTTATAATGGATTCATATGAAGAATGTCGTGCTCCACCTAGACTTTTTCTTCTAGACAAGTTTGATGTGGCTGGTGCTGGGGCATGTCTGAAGCGTTATACGGATCCATCATTCTTTAAAGCAGAGCCTGCTTCCTCTGCAACAGCAACAGTAGAAGTTCACAGGGAAAGGAAAATTCGCAAAGTCAAGCCGAAAAAAGGAGAATGGCTGAGGGATGGTGAAGCCCCTGGAGTTGTTCCCTCACATTCAAAACTTCATCAGTTGTTTCTTGAGGAGCGTATTGAGAATGCCTGTAGTGATCCTGCTCGTCTTGTGAATTTGAAAAAAAGACAATTGGATGGATCTGCTGTTGAATCAAAATCTGGGAGAAGCTACATGGAGAAATTTCTGGAAATCCCCTCACCTAATCATAAAATGGTCTGTGAAACGTCAGTAATTCAGCAGCCTGTGAAATTGATGTCAGGCGACACTAGTGAAACTGGGATTAAAAAACTTGGAATTAATGGCATTTCACCTATGGGAAGGTCTATGGAAAATGGAAAGACACATTCTTCATCAAATGAACAAGAATTAGAATTGAATTCATGCGCAGAAATGGACAGGAGGACAAATAGATATCTTGTGAAGGAGCCTGAACAAATTTTTTCTGGAAGGACTGGGACAGATGAAATGTATTCTAAGCATCTCAAGGTACCTGATGAAACCGAACCGGGGGATGACGATGAACAAAATAAAAGAGAATGCAGCCCAGACGGCTACCATTCTGATGATGCGGCTAGTGAGGTTGATGATTATATGGATGCATTAGCTACCATAGACTCAGAGTTGGAAATAGACAATGAGTGTAGACCTAAGGAAAGCTTCTTGAATGTTCAAAAGGTAACTGATTCAAATGGTGACGAAGAACATCAACTGCAAGCTCAATTTTCAGATTCTCAATCATTTGGAGATTCGTCATTATCTGAAGAAATGAGTTTATTTGAACAAGATAGAAGTGAAGAGCATAATGAAGTGCAAGCTCGACTGCCAGGTTCTTGGTCTGGAGGAACCCCTGGTGCATCAGATGATAATAGTTCATTCAAAGGAGATAGAAATCAAGAGCATACCCAACTGCAAGTTCAGTTTTCAGATTCTCAATCTATTGGAAACTCCTCACCAGAGACTGAAAATATGTCATCCAACCAACTTCCGCAAATTGTTGAATTGCAAAAAACTGGTGGTGAATTTGTCACAAATGATGATACACATGATCAGGGGCGAGCAATATCTGATTCTAGACCAGTCTCTTCTGGTTCATGTCTGGATTCAGAATGTTTATTGTCGTATTCAGATCATGGACCTACAGCTACCTCACTAGCGTCCCTACCTACAAGGACTCAATCAGATGAAACACTGCATGTTCCTGTTGAATGTCATTTAAGATTGCAAGATGACAAAGAGGCTCTCTCCCCAATAAAAGATAATACTTGCCCAGTTGTTTATTTTGACAACAATTCTTCGAACAACTTGGATGTTTCTGATCATCATGTCCATTCCAATACTCTGTTACAAGTATCCGATGAATTGAATTTAGCTCATGAAGGCAAATGTGGTGATCTTTCTCACATCGAAACATTGCAGGCAGATTCTCTAAATGAGTACTGTTCTGAAATATCGGTTGTTGGAGACATTGGTTCACGGGGGGAGGATCCCATTTGTCTGCCCATGGAAATAGACCTGAATTCAGGTACTAAGCTGCTGCTTGACGTCCGGGACTTAAAACCTAATGATGATATTAAAACAATGCAACTTGACTCAGAAGGTTTTTATCCTGTTGTGGAGTCTTCCGTGGAGAATAGCTTTACAGAAGAACTATGCTCTGATTTTACACACGGAAATCCACGAGATGGACCAGATTCGGCTGAATTTGAATTTCTGTATCCTGATCAGTTATCAAGGATAAATCTTGGCGATGAAATCAATGGATCCACCTGCAGTTTGGGTCCAGTTGAAGATGATAATTGTATTAAACATTCAGCTTCCCCTGATTACATACTGCAGGACGACAATGTCATGGTAAATGGTATGGTCCCTGTAGAAGTTCAGTCCAAAGATCTGGATGTATCTGCTATTCCTTCTCTTGATAATGCTGAACCTGATGCAAGCATTGCTAGTTGTCTAGCTTCAAATTCTATTTCTTCCCCATCAATGAATCCTTCAAATTTGCACGAATCTTTCCTAGGTTCTTCAGATTCCCATACAATGGAAATGGAATCCAATGAGGTAGAGTTGACAAAAAATTCCACAGACTTGAATGCAGAGAAGAAGGAAAGTCAACCGGAACCATTTTCATATATCACATCTCCAGTGAGTAGTCTTACTAAGTTGGAAGAATCTCCATCTACTTTTGAAGATCCTCATGAAAAAAATATGGAAGTCAATGAGGAAGTTGCAAGAGATTCTTTGACAGAGTTAAAATCACATATAGAAATGGGTCAACTGGAAATTGCTTCAATTGATGAACGGTTGAACCTGAACGGATCAGTTACTTCTGACTCTAGTATATGTAATAATTATCAACATTCACTGCTTAAGGAGAAAATACAAGATGGTTCTTCTCCCAATGACATGAAAATGGTGACCCAATGTTCAGAGCTAGACACCCAGAGGTCAGAATGTACATTTGTTTTCCAGATTGATCTACAGAACAGCAAAGATAGGTTTTTACCACCTTCCTATAATCAACCACAGCCAGAGAGCCACATTGAGTTTGCGTCTGAAGTCCATCCAGGGGAGCGTTCACATGGTTCCTTATCAATGTCATCTGATCAAAAGATTAGCCCAACAAAACATGTCATGGATTCATCGAAACCTCTACTTCCTGATCTTTTTCCCAAGGCAGCCAAAATCAATCTTGAGGAAACGCCACCTATGCCGCCTCTACCACCAATGCAATGGATAATGAACAAGGTTCAAAATGCTTCCCCAGATTCACAGAGAGAAGAAATATGTGCGAGTCCGGTATCATTCCAACCAATACAGCCTGTTACACCTGATTATAAGAGTCAATTTGGTTTATCAACTTCTGAAAGAGTAACCTTTCCGTATCAGAATCCTTTTTTGCCTGTTGTGGCTGTGGATAGTAATGAAAGCCTACAGCTTCCCGGGATATCAGCAGGTATTTCAGAGCATCCTGTTGCTATTCCTTTGCAATATCCTGTGATGGTAAATGGAGCAAATGGTCAACATAATTACCTAGTTCAGGAGAGAAGCCAAATCTACAACCCTTTCTTAACATTACCCTTGCTATCTTATGGTGGACTTCCCCATGGATGTGTCATTGCTTCAGAGGGAGAAAGCATATTGAAATCAAGTCCATGCCCACCAATACTACCTGCTGAACGTGCTTTTAATGGAGATAATCCCATCTATCAACAAGAAAGACTTTATCAATTCACAAGTCAGTTAATGGAAGATACTAGATTAGAAGCTAAAAAGGATAGTAATGGAGAGAGCGTATTGAGTTCAAGTCTATGGCCACCAATACTGCCCGCTGAATGTGCTGTTTATGGAACTAATCCCATTTTTCAACAAGAAAAATCTTCTCAGTTTACAAGTCAGTTAATGGAAGATACAAGTTTAGAAGCTAAAAAGGATGGTGGTAATCGAGAAAGCATATTGAATTCAAGTCCATTCCCACCAATACTGCCCTCTGAATGCGCTGTTCCTGGGTCTTATCCCATCTTTCAACAAGACAAACTGACTAACTCTGCTAGCCAAATAATGGAAGATGCAATTGAAGCTAAAAAGAATAGTCCTGGAGAATTGCATTCGGTGCTATCTGGTGAATGTCATGTATCTGGAGAAGATCCTATTTCTCCAGAAGAGCAACATTCTCATTCTCCAAATCAATTCATGGAAGAGACTGTTTTAGAATTTACAACGCATGAGGAGTCATCTATTGATTTGGAAAGGGATCAAGGAGATCATTTAATCTCACCCGAGTCACCACCAAGTACAGAAGTTATGCATCCCAATCACAGCCTGCTGCCTCCAGAGGGGAATCGGGCACTCTCATTGGATACATCTTCCCAATCATCAGAGTTTGATAGTCAAATACCAAATGGAAAACCAAAGAAGAAACTTCTTCCTCCTCCTCCTCCCCAGAACCATTTATTTGATGTTGCTGCTGCTCTTGACAAAAGCAGACTGAGGAAGGTTACTGATCGTGTTAGGCCCCAGATAGCACCAAAGGTAGATGATAGAGACTCATTGTTAGAACAGATTAGAACGAAGTCCTTCAACTTGAGGACTGCTGTGGTTACACGGCCCAACATTCAGGGTCCGAAAACAAACTTGAGGGTTGCTGCCATCTTGGAAAAAGCAAATTCTATTCGCCAGGCATTGGCTGGAAGTGATGAAGACGATGATGCAGACAGTTGGAGTGATTCTTGA 4818 0.4128 MPISRYRIRNAHGLADPELIGAADKDDSEALLEAVAMTGLVGFLRQLGDLAQFAAELFHDLHEEVMATAERGHSLMSRVQQLEAEIPPIEKAFLSRTHHSSFFTNGGIDWCPNLRSEQNLITRGDLPRFIMDSYEECRAPPRLFLLDKFDVAGAGACLKRYTDPSFFKAEPASSATATVEVHRERKIRKVKPKKGEWLRDGEAPGVVPSHSKLHQLFLEERIENACSDPARLVNLKKRQLDGSAVESKSGRSYMEKFLEIPSPNHKMVCETSVIQQPVKLMSGDTSETGIKKLGINGISPMGRSMENGKTHSSSNEQELELNSCAEMDRRTNRYLVKEPEQIFSGRTGTDEMYSKHLKVPDETEPGDDDEQNKRECSPDGYHSDDAASEVDDYMDALATIDSELEIDNECRPKESFLNVQKVTDSNGDEEHQLQAQFSDSQSFGDSSLSEEMSLFEQDRSEEHNEVQARLPGSWSGGTPGASDDNSSFKGDRNQEHTQLQVQFSDSQSIGNSSPETENMSSNQLPQIVELQKTGGEFVTNDDTHDQGRAISDSRPVSSGSCLDSECLLSYSDHGPTATSLASLPTRTQSDETLHVPVECHLRLQDDKEALSPIKDNTCPVVYFDNNSSNNLDVSDHHVHSNTLLQVSDELNLAHEGKCGDLSHIETLQADSLNEYCSEISVVGDIGSRGEDPICLPMEIDLNSGTKLLLDVRDLKPNDDIKTMQLDSEGFYPVVESSVENSFTEELCSDFTHGNPRDGPDSAEFEFLYPDQLSRINLGDEINGSTCSLGPVEDDNCIKHSASPDYILQDDNVMVNGMVPVEVQSKDLDVSAIPSLDNAEPDASIASCLASNSISSPSMNPSNLHESFLGSSDSHTMEMESNEVELTKNSTDLNAEKKESQPEPFSYITSPVSSLTKLEESPSTFEDPHEKNMEVNEEVARDSLTELKSHIEMGQLEIASIDERLNLNGSVTSDSSICNNYQHSLLKEKIQDGSSPNDMKMVTQCSELDTQRSECTFVFQIDLQNSKDRFLPPSYNQPQPESHIEFASEVHPGERSHGSLSMSSDQKISPTKHVMDSSKPLLPDLFPKAAKINLEETPPMPPLPPMQWIMNKVQNASPDSQREEICASPVSFQPIQPVTPDYKSQFGLSTSERVTFPYQNPFLPVVAVDSNESLQLPGISAGISEHPVAIPLQYPVMVNGANGQHNYLVQERSQIYNPFLTLPLLSYGGLPHGCVIASEGESILKSSPCPPILPAERAFNGDNPIYQQERLYQFTSQLMEDTRLEAKKDSNGESVLSSSLWPPILPAECAVYGTNPIFQQEKSSQFTSQLMEDTSLEAKKDGGNRESILNSSPFPPILPSECAVPGSYPIFQQDKLTNSASQIMEDAIEAKKNSPGELHSVLSGECHVSGEDPISPEEQHSHSPNQFMEETVLEFTTHEESSIDLERDQGDHLISPESPPSTEVMHPNHSLLPPEGNRALSLDTSSQSSEFDSQIPNGKPKKKLLPPPPPQNHLFDVAAALDKSRLRKVTDRVRPQIAPKVDDRDSLLEQIRTKSFNLRTAVVTRPNIQGPKTNLRVAAILEKANSIRQALAGSDEDDDADSWSDS* 1606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2179 1605 MobiDBLite consensus disorder prediction 436 451 - -
Tpr6g2179 1605 MobiDBLite consensus disorder prediction 436 522 - -
Tpr6g2179 1605 Gene3D - 1 90 - -
Tpr6g2179 1605 MobiDBLite consensus disorder prediction 874 931 - -
Tpr6g2179 1605 MobiDBLite consensus disorder prediction 1479 1500 - -
Tpr6g2179 1605 MobiDBLite consensus disorder prediction 902 920 - -
Tpr6g2179 1605 MobiDBLite consensus disorder prediction 359 387 - -
Tpr6g2179 1605 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 906 1292 - -
Tpr6g2179 1605 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 1 902 - -
Tpr6g2179 1605 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 1290 1341 - -
Tpr6g2179 1605 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 1345 1605 - -
Tpr6g2179 1605 MobiDBLite consensus disorder prediction 478 522 - -
Tpr6g2179 1605 Gene3D - 104 201 - -
Tpr6g2179 1605 Gene3D - 1507 1604 - -
Tpr6g2179 1605 MobiDBLite consensus disorder prediction 1479 1494 - -
Tpr6g2179 1605 MobiDBLite consensus disorder prediction 874 888 - -
Tpr6g2179 1605 MobiDBLite consensus disorder prediction 452 466 - -
Tpr6g2179 1605 PANTHER WASP-1 1 902 IPR028288 GO:0005856|GO:0030036
Tpr6g2179 1605 PANTHER WASP-1 906 1292 IPR028288 GO:0005856|GO:0030036
Tpr6g2179 1605 PANTHER WASP-1 1345 1605 IPR028288 GO:0005856|GO:0030036
Tpr6g2179 1605 PANTHER WASP-1 1290 1341 IPR028288 GO:0005856|GO:0030036
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2179 Tpr-Chr6 23733103 23740751 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2179 - - cam:101512913 1909.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g2179 6 23733103 23740751 Tpr4g0639 4 5939634 5947707 PCT