Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0639 ATGCCACTCTCCAAGTACCTTATAAGGAACGAGTTCAGTTTAGCGGATCCCGAACTTTACCGTGCTGCTGACAAAGATGATCCTGAAGCTCTTCTTGAAGCTGTTGCTATGGCTGGACTCGTCGGACTTCTACGTCAGCTCGGTGACCTTGCTGAGTTTGCTGCTGAGATCTTCCATGATTTACATGAAGAAGTAATGGCTACTGCTGCAAGAGGCCACAGTCTTACTGCTCGTGTTAAACAGCTTGAGTCTGAAGTTCCTTCACTTGAAAAGGCCTTTTTCTCTCAAACTCATCATTCATCATTCTTTACTAATGGAGGGATTGATTGGCATCCCAATCTTCAGTCTGAACAAAATCTCGTTACTCGTGGAAACTTTCCTCGAATGATAATGGATTCATATGAAGAATGCCGTGGTCCCCCAAGGCTGTTCCTTCTGGACAAGTTTGATGTGGCTGGGGCTGGGGCATGTCTGAAACGTTATACTGATCCATCGTTCTTTAAGATGGAGTCAACTTCATCTGTAAGAGCCACAGTACAAGTCCACAAGGAAAAGAGGATTCGTAAAGTCAAGCACAAGAAAGGAGCACGAGTGAGGGATAATGAAGCTCCTAATGCTGTACCTACACATTCAAAATTACATCAGCTTCTTCTTGAGGAACGTATTGAGAATGGTTATAGTAATCCAGCGCGCCTAGTGAAGTTGAAGAGAAGACAATTGAATGGACCAGCTGTTGAAACAAAAGCTGGGAAAAGTTACATGGAGAAATTTCTAGAAACTCCTTCACCTGATCCTAAAATGATTTATGAAACTTCAATCTTTCCGCTGCTCGTGAAACCGTCATCAGATGATTCTAGCGAAGCAGGGATTAGAATTCTTGAAATCAGTAGCATCCGTCCTTTGAAAAAATCAATCGGAGATAAAAACACATGTTCATATTCATCCCCTAATGAGCAGGAATTTGAACTAAATCAATTTCCAGAAGAGGTTGGTGAGACAAATGGAGATCTTGTGATGGTGAAAGAACAAATCCCAGTGGGTGTAGGAGATGAAAAGCCTTTTAATGATGTCAAGGTGTCTGATGAAACAGAATTGGCAATCAATGAACAAAAGAAAATAGATGGCAGCTTAGATAGGTACCATTCTGATGATGTGACTAGTGAGGTTGACAACTACATGGATGCTTTAACTACCATGGAGTCAGAATTGGAAACCGATGATGAGTATAAACCTAAGAAAAGCTTGAGTGTTCGAAAGGTAAGAAATACTAATAATAAAAAACGTCAACTACAAGCTCAGTTTTCAGATTCTCGGTCATTGGCAGACTCATCAACATCTGATGACAATAGCTCATTCAAACATCAGAGAAATGAGGATATTGAAGTAAAATCTCGGTTATCAGATTCTCACTCAACTGGAACCTCCTCAACATCAGAAAATAATAGCTCATTCAGGGGATACGAAGATGAGCACGTGGAACTGCAAGCTCACTTTTCAGATTCTCAATCTATTGGAAACTCCTCTACGTCAGATTTAAATAGTTCTTCCAAGAAAAGCAAATCTTATGTCCCTCATTATGGACCAGAAATTGAAGGCACACCATCCAACCAGCTTCCTAAAATTGTTGAATTTCAAAACACAGACAGTAGAAAGTTTGTCATGCGTGATGATGCACGTGTTCATGATGAAGAGGTTTCTGACTCTGGGAAAACATATTCTGATTTGTTGACTTCAAGAAAGGTGTCGTGTTCTGATCTTGAACCTACCAAACCAGGGATACTACCTGCAGCGACCCAGTCAGATGAGACCGTTTCTGACAAAGTTGAACTTAATATAAGATTAGGCAATGATGTGGACAGAACATGTCTTGTAGAATCTGTTGCTTCCAAACCTTCATCTCCTTCCCTAATAAAAGATGATACTTTCCCGGTGGATTCTTCTGATAAAATTTCATCGGACAACTTGGTTGATGATGATCCACATATTCGTTCTCGTGATCTGTTACAAGTTTCTAATGATTCACAAGAAGATTCCCTTTGCCCATCCATTGAAGAGTTAGACTTGAATTCAGGTCTTAATGCGGTGCTTGATCGTCAAGGCTCAAAAGATGAGGATTGTATTAATATTGCACCCCAACTTAATCCAACTGCTGTGAAGGTTCCTCCAGTGAGTTTCTTTACTGGCGAGCTAACTTCTGGTTTAACTCAAAGTAATCCACAGGGTGAACAAGACTCAACCGAAATTGAAGTTTCGTTCTCTGATCGTCAATCAAACTATGGAAATATACCAAAAACGGTGCATGGTGATGAAATAATTGGATCCTGCAGCAGTGTTGATCCAGTTGAAGGTGATGATGGTCATTTTAAAAATCCACCTTCTCCTTATAATCATGTGATGGTAAATGATGATCTCAGTGAAATTCTTGAGTCGAAAGATGTCCCTGCTTCTTCAAATTCTTATCAGACGGAATGCAGTGACGTTGAACTGACTCATATTTCCATGGCCACGAATACAGAGACGAGCAAGAATCAATTGGCACCATCGTTAGATACAACATCATCCGATATCATATATTCTCCAATGAGTAATGTTACAAAACTTGAAGAATCTCTTTCTACTTTTGCAAATTCAAATGAGAAAGAGACGGAAGTCCACGAGGAAGTTGCTAGAGAATCTTCCACAGAGCTAGAGGGACAGAAGATTGCGGGTCATCCAGAAATTGTTTCTGCAGATGTACAAATGAATCTGAACAAATCGCTGCCCTGTGATATTCAAGATTTGGAAAATAATATTGAAAACTCATCTCCTAGGGAGCAAATCCAACAGAGTGCTGTTTTGGATGATGTGAAAATGGGGCCTGACTTTTCTGGGTTTGACACTCCACAGTCAGAATCTATGAGTTGTGGCCAGAATGATCTTTTACAGAATGGCAGAGATAGTTTTTCATCACCACCTTATAATAAGTTGGAGTCTCAAAATTATTTAGAGCCCCACTTACCATCTCAAGTTGGTGAACAGGATGGAGAGTTTCCGCTCAAATATGAGGAAAACTTTGCCTCTGAGAAATCTCAGCAGATGCAGATATATCAATTGGAGCAAGAAGGCACTCATGCTACTTCTGAATCTGTTTCAGAAAACCCTGCAGATGAATCATCATCATCATTTTATTCTTCACCACAGTCATCTGGCTTGGAGATTAATCCTACACAATATGTCATGGATCCATTGAAGCCTCTTCCTGACCTCTTTCCCAAGACAACTGAAGACAAACTTGATGAGATGCCACCTATGCCTCCTCTACCTCCTATGCAATGGAGAATGGGCAAGGTTCAACATACTTCCCAAGATTCGCATGAGGAGTTAAAAGTGCATCAGCCTTCTGTCCAATCAATGCAGCCAATTATGCCCGATAAGAAGTCTCAGTTTGGTTTTCCAGCTTCTGTTGGAGAGACCTTATTTCATCAGAATCCATTTTTGCCTGTCATGGCTTTGGGAAGTGATAAGCTCCAACATTCTTCTGGGTTTTCTGTGGGTGTTTCAGGGCATCCTGTTGCTGTACCTTTTCAGTTTCCTATCATGGTTGATGACACAACCGGACAGTATAATTACGTAGTGCTGGACGGAAGCCAGATTCAGAACCCCTTTTTATCACTGCCCATGGTACCTACAGCTGTGCATCCACCACGTGGTTACATTGTTCCTTCTGAGGGAGAAATGGCACAGAATTCAAACCCATATGCACCAACACTACCTGCTGCATTTACTGTATCTGGACATCATTCCACGTTTCCACAAATGGAACCATTTCAATATCCAAGTCAATTAATGACAGAGACTAGTGCAGATGATAAAACACTTGAGCAGCCTATAGATAATGTAGTATCTAGGGATGGGCCTCCAAACAATCATGTTATTGCATCTGAGGGAGAATTGGTACATAATTCAAACTCGTTCCTTCCAATACCACCTGCCGAATGTGCTAATTCGGGACATGATTCCATCTCTCCTATAGAAACTCAATCTCCTAGTCAATTAACGGCAGAGACTAGTTCAGATGATACAACACTTCTGCAGCATATGAGTAATGTTGTATCTATGGACAGGCCTACACACAGTCACATTGTCACTCCTGAGGAAGAAATGGTACAAAGTTCTAATCCGTGCCCTACTATATCATCTGCTGAATCTGCTGTTTCTGAACATGATTCCATCTCTCCACAAGAAAAACCAACTCAACCTCCAAGTCAGTTACCAGCGGAGACTAGTTCGGAAGTTAAACCCCCTAATCATTCTGTAAGTAATGCAGAAGGGGCACAGGGACAATTGGGTATTTCACTCATGTTGCCACCAAATATGGAGAGTGTGGATCCCAATCAGAGTTTCCGGCTCTTTGAGGGGGAAATGTCGTCATGGGATCCATCTGGTCAAACATCAGATTTTGAGAGTGAAAGGACAAATGTGAAATCAAAACACAAAATTCCTCGTCCTCGAAATCCTCTGATTGATGCTGTTGCTGCTCACGACAAAAGCAAGCTTAGGAGGGCTACTGAACGGGTTATGCCTGAAATAGGACCAAAGGTAGATGAAAGAGATTCATGGTTAGAACAGATAAGAACAAAGTCCTTCAACTTGAAGCCTGCTGTGGCCACACGACCTAGAACTCAAGGTCCAAAAACAAATATGAAGCTTGCTGCTATCTTGGAGAAAGCTAATTCAATTCGCCAGGCTCTGGCTGGAAGTGATGAAGATGATGACGCGGACAGTTGGAGTGATTCTTGA 4779 0.4141 MPLSKYLIRNEFSLADPELYRAADKDDPEALLEAVAMAGLVGLLRQLGDLAEFAAEIFHDLHEEVMATAARGHSLTARVKQLESEVPSLEKAFFSQTHHSSFFTNGGIDWHPNLQSEQNLVTRGNFPRMIMDSYEECRGPPRLFLLDKFDVAGAGACLKRYTDPSFFKMESTSSVRATVQVHKEKRIRKVKHKKGARVRDNEAPNAVPTHSKLHQLLLEERIENGYSNPARLVKLKRRQLNGPAVETKAGKSYMEKFLETPSPDPKMIYETSIFPLLVKPSSDDSSEAGIRILEISSIRPLKKSIGDKNTCSYSSPNEQEFELNQFPEEVGETNGDLVMVKEQIPVGVGDEKPFNDVKVSDETELAINEQKKIDGSLDRYHSDDVTSEVDNYMDALTTMESELETDDEYKPKKSLSVRKVRNTNNKKRQLQAQFSDSRSLADSSTSDDNSSFKHQRNEDIEVKSRLSDSHSTGTSSTSENNSSFRGYEDEHVELQAHFSDSQSIGNSSTSDLNSSSKKSKSYVPHYGPEIEGTPSNQLPKIVEFQNTDSRKFVMRDDARVHDEEVSDSGKTYSDLLTSRKVSCSDLEPTKPGILPAATQSDETVSDKVELNIRLGNDVDRTCLVESVASKPSSPSLIKDDTFPVDSSDKISSDNLVDDDPHIRSRDLLQVSNDSQEDSLCPSIEELDLNSGLNAVLDRQGSKDEDCINIAPQLNPTAVKVPPVSFFTGELTSGLTQSNPQGEQDSTEIEVSFSDRQSNYGNIPKTVHGDEIIGSCSSVDPVEGDDGHFKNPPSPYNHVMVNDDLSEILESKDVPASSNSYQTECSDVELTHISMATNTETSKNQLAPSLDTTSSDIIYSPMSNVTKLEESLSTFANSNEKETEVHEEVARESSTELEGQKIAGHPEIVSADVQMNLNKSLPCDIQDLENNIENSSPREQIQQSAVLDDVKMGPDFSGFDTPQSESMSCGQNDLLQNGRDSFSSPPYNKLESQNYLEPHLPSQVGEQDGEFPLKYEENFASEKSQQMQIYQLEQEGTHATSESVSENPADESSSSFYSSPQSSGLEINPTQYVMDPLKPLPDLFPKTTEDKLDEMPPMPPLPPMQWRMGKVQHTSQDSHEELKVHQPSVQSMQPIMPDKKSQFGFPASVGETLFHQNPFLPVMALGSDKLQHSSGFSVGVSGHPVAVPFQFPIMVDDTTGQYNYVVLDGSQIQNPFLSLPMVPTAVHPPRGYIVPSEGEMAQNSNPYAPTLPAAFTVSGHHSTFPQMEPFQYPSQLMTETSADDKTLEQPIDNVVSRDGPPNNHVIASEGELVHNSNSFLPIPPAECANSGHDSISPIETQSPSQLTAETSSDDTTLLQHMSNVVSMDRPTHSHIVTPEEEMVQSSNPCPTISSAESAVSEHDSISPQEKPTQPPSQLPAETSSEVKPPNHSVSNAEGAQGQLGISLMLPPNMESVDPNQSFRLFEGEMSSWDPSGQTSDFESERTNVKSKHKIPRPRNPLIDAVAAHDKSKLRRATERVMPEIGPKVDERDSWLEQIRTKSFNLKPAVATRPRTQGPKTNMKLAAILEKANSIRQALAGSDEDDDADSWSDS* 1593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0639 1592 MobiDBLite consensus disorder prediction 1377 1436 - -
Tpr4g0639 1592 MobiDBLite consensus disorder prediction 638 658 - -
Tpr4g0639 1592 MobiDBLite consensus disorder prediction 1470 1497 - -
Tpr4g0639 1592 MobiDBLite consensus disorder prediction 1033 1063 - -
Tpr4g0639 1592 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 1 673 - -
Tpr4g0639 1592 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 1395 1592 - -
Tpr4g0639 1592 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 675 1379 - -
Tpr4g0639 1592 MobiDBLite consensus disorder prediction 497 523 - -
Tpr4g0639 1592 MobiDBLite consensus disorder prediction 403 484 - -
Tpr4g0639 1592 PANTHER WASP-1 1 673 IPR028288 GO:0005856|GO:0030036
Tpr4g0639 1592 PANTHER WASP-1 1395 1592 IPR028288 GO:0005856|GO:0030036
Tpr4g0639 1592 PANTHER WASP-1 675 1379 IPR028288 GO:0005856|GO:0030036
Tpr4g0639 1592 Gene3D - 1481 1591 - -
Tpr4g0639 1592 Gene3D - 104 223 - -
Tpr4g0639 1592 MobiDBLite consensus disorder prediction 497 521 - -
Tpr4g0639 1592 MobiDBLite consensus disorder prediction 426 448 - -
Tpr4g0639 1592 Gene3D - 1 90 - -
Tpr4g0639 1592 MobiDBLite consensus disorder prediction 449 466 - -
Tpr4g0639 1592 MobiDBLite consensus disorder prediction 642 658 - -
Tpr4g0639 1592 MobiDBLite consensus disorder prediction 467 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0639 Tpr-Chr4 5939634 5947707 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0639 - - cam:101510085 2244.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0639 4 5939634 5947707 Tpr4g0639 4 5939634 5947707 ECH
Tpr6g2179 6 23733103 23740751 Tpr4g0639 4 5939634 5947707 PCT