Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2159 ATGAACATGGAAGAAACTCAAGTGATGAAAACGACGACGTATCACTCTGAACCGGGTTCATCAAATAACAGTTATAGAACCGAGATTGACACTTCTGCTCCATTTGAATCGGTTAAAGAAGCTGTTAACCGGTTCGGTGGTGTTGGTTATTGGAAACCCTTTCTCAATGTTAATCATCTTTCATCTCTTACTTCTCATCATTCTATGCACCATGTAGAAGAGCTTGATAAAGAGAAACTGGAGGAGCAGGCAAGATTGCTCGAGAAAGAACTGATGCTGAAAGAAAGAGAAACTCTTGATGTGTTGAAAGAATTGGAAAAGACCAAAAGGCTTGTTGAACATTTGAAATCAAAGCTGCAAAAGGAAGAATCTGAAAGAAATCTGAATTTTGGGATGAATGTGTGTGATCAAAGATCAATGGTAAATGAGAAAGAAATGAAGGAAAACCAATCGAGTCCGTCTGAGTTTCTTCAATCTGCGAAGGAATCTTCTATACCTTCCCATGTATCTTCGCCAAACTTAATATTAATGGAATTGAAGCAGGCCAAGTTGAACCTTACCAAAACTACTCATGATATTGCCGATGTACGAGCTACTGTTGAATCTCTTAATAAGAAATTAGAGAATGAATGGATCTCACTTGAGAAAACCCGTGAAAGGTTAACTCAAAATTGTTCAAAAGTGTCTTCTCTTGAGGATGAGCTAAACCAAACCAGATTAAGACTGCAAGTTGTAAAAGTTGCTGCTTCTGGTGATCCTTCAGATGTTACAATAGTGCTCCATCGATTGAATTCGGAGGCCGAGCATTTCAGAAAAATGAGAGAATCCGCAAAATCAGAAGTTTTGGAAACAATGTCTGAGATTGAGATGACAAAAGCTATGATAAAAACTGCAGAAATCAGGTTGGTTGCGGCAACGAAAATGAAGGAAGCTTCTAGAGCTGCAGAAGCTGCTACCCTTGCAGATATTAACGCGTTGTCTAACCATGATGGTTCACCAGGAGAATGTACGCAAAAATGCGAGGAAATTACTCTTTCGTTTGAAGAATATACTACTCTAATCCGTAAAGCTCAAGAAGCACAAGAACAATCAAAGAATAGAGTAGCAGAAGCTATGCTTGAAGTCGATGAAGCAAATTCATCGCAAATGGATATTTTAAAAAGGGTAGAGGAAGCAGCAGAAGAAGTTAAAACCCGCAAGAAGGTACTTGAAGAAGCTTTACAAAGGGTAGAAGACGCAGATAGAGGGAAGCTAGAAGTTGAAGAGGCTTTGAGGAAGTGGCGATCTGACAGTCACAAAAGGCGTTCTTTGACGAATAGCTGTATGAAGTTTAAAAACTCTGGTCCATCTGATCATAGGAGAGATCCTAGGTTACTTGATGTAAATGGATTGAATTTGGTAAACGATGAAGCCAAGCCTGTTTTAAAGTCAACTTTATCAATAGGACAAATACTGAGCCAAAAGCTGCTTATGCCGGAAGAGATTGAAGAGGAGATAGTTCAAGGTGAAAGAATCTCGATGAAACGGAGTGAGTCATTAGGCCAGATGCTTGGCAAAGACAATGATGGTCCGTTGTCTGATGAGCAAGTCGAGAAAGAAAATGGTCAGAAGCAGTCTTCTACTAAGAGAAAGAAATTTGGGTTTGCAAGATTCTCTCTTCTTTTGTCAAAACAGCATAAAAAAAAGAAGAACCCAACGCTGAATTTGAGGTGA 1713 0.3923 MNMEETQVMKTTTYHSEPGSSNNSYRTEIDTSAPFESVKEAVNRFGGVGYWKPFLNVNHLSSLTSHHSMHHVEELDKEKLEEQARLLEKELMLKERETLDVLKELEKTKRLVEHLKSKLQKEESERNLNFGMNVCDQRSMVNEKEMKENQSSPSEFLQSAKESSIPSHVSSPNLILMELKQAKLNLTKTTHDIADVRATVESLNKKLENEWISLEKTRERLTQNCSKVSSLEDELNQTRLRLQVVKVAASGDPSDVTIVLHRLNSEAEHFRKMRESAKSEVLETMSEIEMTKAMIKTAEIRLVAATKMKEASRAAEAATLADINALSNHDGSPGECTQKCEEITLSFEEYTTLIRKAQEAQEQSKNRVAEAMLEVDEANSSQMDILKRVEEAAEEVKTRKKVLEEALQRVEDADRGKLEVEEALRKWRSDSHKRRSLTNSCMKFKNSGPSDHRRDPRLLDVNGLNLVNDEAKPVLKSTLSIGQILSQKLLMPEEIEEEIVQGERISMKRSESLGQMLGKDNDGPLSDEQVEKENGQKQSSTKRKKFGFARFSLLLSKQHKKKKNPTLNLR* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2159 570 MobiDBLite consensus disorder prediction 515 544 - -
Tpr6g2159 570 Coils Coil 386 423 - -
Tpr6g2159 570 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 8 564 - -
Tpr6g2159 570 PANTHER MYOSIN HEAVY CHAIN-LIKE 8 564 - -
Tpr6g2159 570 MobiDBLite consensus disorder prediction 145 167 - -
Tpr6g2159 570 Gene3D - 174 329 - -
Tpr6g2159 570 Coils Coil 354 374 - -
Tpr6g2159 570 MobiDBLite consensus disorder prediction 151 167 - -
Tpr6g2159 570 MobiDBLite consensus disorder prediction 1 24 - -
Tpr6g2159 570 Coils Coil 260 280 - -
Tpr6g2159 570 Coils Coil 204 224 - -
Tpr6g2159 570 Pfam Weak chloroplast movement under blue light 27 126 IPR008545 -
Tpr6g2159 570 Pfam Weak chloroplast movement under blue light 149 434 IPR008545 -
Tpr6g2159 570 Coils Coil 70 97 - -
Tpr6g2159 570 MobiDBLite consensus disorder prediction 524 540 - -
Tpr6g2159 570 Coils Coil 102 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2159 Tpr-Chr6 23364190 23367845 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2159 - - gmx:100783770 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g2159 6 23364190 23367845 Tpr4g1044 4 10109215 10112513 PCT