Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1044 ATGGAAATTCATGATGCAGTTGTGGTGAACCGGATCGAACCCGGTTCAAAGGAGTCCGGTTTAAGAGCTGAGATTGATACTTCAGCGCCGTTTGAGTCTGTGAAAGAAGCCGTTACTCGATTCGGAGGTGTTGGTTACTGGAAACCTACTAACACTACTAATCTTGTCACTCCTCAGCAAAACACAGAAGAGCTTGATGCTGGAAAATTGGAGGAACAAGCAGTGGTATTGGAGAAAGAGCTTATAATCAAAGAAAGGGAAACTCTTGATGTTTTAAAAGAGTTAGAAAGTACCAAAAAGCTTGTCGAAAATCTGAAATCAAAGTTACAAGCAGAAGAATCTGATGCAAATTTGAATACTAAGTTGAATTCATGTGATGATAAGGAGAATGAGAAAGAAGAAGAAAAGGAAAACCAAGTTCGTCGTGTTCCTTCTAATTCGGCGACTCCTGGTTTAATATTAAGGGAATTGAAGCAGGCGAAAATGAATCTAAACCGGACTACGAATGATATTGCTGATGTTCGAGTATCTGTTGAATCGCTCAACAAGAAACTAGAGAAGGAGAGAATCTCGCTCGAGAAAACCCGTGAGAGGTTAACTCAAAACTCTTCAAAAATAACTTCTTTAGAGGAAGAGCTAAACCAAACAAGACTTAAACTGCAAGTGGTGAAAGACGGTGAAATCGAATGTGGTTCTGATGAACCTTCCGATATTACGGAAGAGCTTCAACGGTTGAGTTCTGAGGCAGAACATTTCAAGAAAATGGGAGAAGCTGCTAAATCAGAAGTATTGAGAGCTATGTCTGAGATTGAACAGACAAAAGGTATGATAAGAACATCTGAAATTAGGTTAGTTGCTGCTCGGAAAATGAAGGAAGCTGCTAGAGCAGCCGAAGCAGCCGCACTTGCCGAGATAAAAGCTTTATCTTATCTTGATGGAGATTGTGGTCAAATCCATGATGGAGTTACTCTTACCTTTGAAGAGTATAATGCTCTAACACGCAAAGCTCGAGATGCCGAGGAACAGTCGAAGAAAAGAGTTCTTGATGCTATGTTTCAAGTTGATGAAGCAAATGTATCCAAAATAGATGTATTAAAGAGGGTTGAAGAAGCTACATTAGAAGTTAATACAAGCAAGAAAGCACTTGAAGAAGCTTTGGAAAGGGTAGAGGCTGCAAATAGAGGAAAATTAATGGTTGAAGAGGCTTTAAGAAAATGGCGATCGGAGGGTAACAAAAGGCGATCATCAATGCAAAATAATAACTTTACTAAGTTTAAAAACCCTTCTCACTACCGGAGAGACTCTCGATTATTCAATGTAAATGGAATGAATCAAGTTGATGATGAAGTCAATCCGGTTCTTAAGCCGACTCTATCAATAGGACAAATATTGAGTCGGAAATTGATGATGCCGGACGAATTTGAAGGTGGGATGATTATAGAAAGAGGCTCGATGAAACGAAAAGTGTCTTTGGGTCAGATGCTTGGTAAACAAAACTATGATCTATCTTTTGAATTTGATAGGCAAGCTGAGAAAGAAAATGGTCAGAAGCAGTTTTCTTCTGCTAAGAGAAAGAAATTTGGATTTGGTAGATTCTCACTTCGTTTGACAAAACAACAAAAGAAAAAGAAGCCAACTTTGAATTTGAGGTGA 1653 0.389 MEIHDAVVVNRIEPGSKESGLRAEIDTSAPFESVKEAVTRFGGVGYWKPTNTTNLVTPQQNTEELDAGKLEEQAVVLEKELIIKERETLDVLKELESTKKLVENLKSKLQAEESDANLNTKLNSCDDKENEKEEEKENQVRRVPSNSATPGLILRELKQAKMNLNRTTNDIADVRVSVESLNKKLEKERISLEKTRERLTQNSSKITSLEEELNQTRLKLQVVKDGEIECGSDEPSDITEELQRLSSEAEHFKKMGEAAKSEVLRAMSEIEQTKGMIRTSEIRLVAARKMKEAARAAEAAALAEIKALSYLDGDCGQIHDGVTLTFEEYNALTRKARDAEEQSKKRVLDAMFQVDEANVSKIDVLKRVEEATLEVNTSKKALEEALERVEAANRGKLMVEEALRKWRSEGNKRRSSMQNNNFTKFKNPSHYRRDSRLFNVNGMNQVDDEVNPVLKPTLSIGQILSRKLMMPDEFEGGMIIERGSMKRKVSLGQMLGKQNYDLSFEFDRQAEKENGQKQFSSAKRKKFGFGRFSLRLTKQQKKKKPTLNLR* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1044 550 Coils Coil 67 87 - -
Tpr4g1044 550 Coils Coil 92 115 - -
Tpr4g1044 550 Gene3D - 153 310 - -
Tpr4g1044 550 Coils Coil 164 226 - -
Tpr4g1044 550 Coils Coil 118 138 - -
Tpr4g1044 550 MobiDBLite consensus disorder prediction 122 141 - -
Tpr4g1044 550 Pfam Weak chloroplast movement under blue light 23 113 IPR008545 -
Tpr4g1044 550 Pfam Weak chloroplast movement under blue light 111 413 IPR008545 -
Tpr4g1044 550 PANTHER MYOSIN HEAVY CHAIN-LIKE 15 544 - -
Tpr4g1044 550 Coils Coil 368 388 - -
Tpr4g1044 550 MobiDBLite consensus disorder prediction 113 150 - -
Tpr4g1044 550 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 15 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1044 Tpr-Chr4 10109215 10112513 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1044 - - gmx:100783770 696.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1044 4 10109215 10112513 Tpr4g1044 4 10109215 10112513 ECH
Tpr6g2159 6 23364190 23367845 Tpr4g1044 4 10109215 10112513 PCT