Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1994 ATGGATAAATCATCCAACTTTGGTGATAACTGTGATGTGAGGTATCACCTTTCACCTTCTATGGATCATTCAGTTAGTGAAACTCCTCCTTTTTCTAGATTGAGTGGTGATTCTTTCGGATACTGCCGAGTTTGGACAAGCTCAGACGCGTCAAATTCAAATTTCTCTGACACTCTAGATGATAGCAGCTATGCCAGTGAACCTTCGCCTTTGCCTTCACCTTCGCCTTCTCAGTGGAGGGATGTTAAACCTGGTCTTTCTAGGCTAGGAATGAAGCTGCGCAAGCAATCAGTTGATGATAAACTTGATGATAATGATCTCTTGGATTCAGGTGAGCTTGAAATGATGAAGGAAAGATTTGCAAAACTTCTACTAGGAGAAGACATGTCTGGTGGAGGAAAAGGTGTTTCCACAGCAGTTACAATCTCAAATGCCATTACCAATCTCTATGCAACAGTATTTGGACAAAGTTTAAAGTTGGAGCCGCTGAAGCCAGAGAAGAAAGCCATGTGGAAAAGGGAAATGAAGGTTCTTTTATCAGTGTGTGATTACATACAAGAATTTGCCCCAACTGCACAATATTTAGAAGATGGCACAATTGTGGAGATGATGAAAAGCAGACCAAGGTCAGATATCTATATCAACCTCCCTGCACTACAGAAGCTTGACACAATGCTTATAGAAATATTAGATTCTTTTGAGGATACTGAATTCTGGTATGCAGAGAATATATCAGCAAGTTCGCCTCATTTACGCGCAGCCTCATTTCGGAAGATTGTTCCAAGGAAAGATGAGAAATGGTGGTTACCAGTTCCCTGTGTTCTCCCTGGTGGCCTCTCTGAGAAGTCAAGGAAACACCTTGCAGAGAAACGGGATTGTGCTAATCAAATTCATAAAGCGGCAATGGCAATAAATAGCAATATTCTTGCGGAAATAGATATTCCAGAAACATATATAGATGATCTTCCAAAGAGTGGAAGAGGAAGTCTAGGAGACACAATTTACCACTATATGTATACTGCTGACAAGTTCTCGCCTGATCGCCTTCTTGACTGTCTCAAAATAAGTTCTGAGCATGAAGCACTCGATCTAGCAGACAGGGTCGAATCATCGATGTACACGTGGAGACGTAAAGCTTGTCTTAGCCATTCAAAGTCATCATGGAAAGAAGTAAAAGATCTGATGGATGACACCGATTGGAAGGACAAAAACTACATCTTAGCTGACAGAGCTGAAGCTTTGTTGTTTAGCCTCAAGCAAAGATATCCTGAACTTTCACAAACTTCTTTGGATACATGCAAGATCCAATACAACCGTGATGTGGGGAAAGCAGTACTAGAAAGCTATTCAAGAGTTTTAGAAGGCCTAGCATTTAACATTGTTGCTTGGATTGAAGATGTTCTGTGTGCAGATAAATCAATGACAAATAGAGAAGTCTAG 1440 0.4083 MDKSSNFGDNCDVRYHLSPSMDHSVSETPPFSRLSGDSFGYCRVWTSSDASNSNFSDTLDDSSYASEPSPLPSPSPSQWRDVKPGLSRLGMKLRKQSVDDKLDDNDLLDSGELEMMKERFAKLLLGEDMSGGGKGVSTAVTISNAITNLYATVFGQSLKLEPLKPEKKAMWKREMKVLLSVCDYIQEFAPTAQYLEDGTIVEMMKSRPRSDIYINLPALQKLDTMLIEILDSFEDTEFWYAENISASSPHLRAASFRKIVPRKDEKWWLPVPCVLPGGLSEKSRKHLAEKRDCANQIHKAAMAINSNILAEIDIPETYIDDLPKSGRGSLGDTIYHYMYTADKFSPDRLLDCLKISSEHEALDLADRVESSMYTWRRKACLSHSKSSWKEVKDLMDDTDWKDKNYILADRAEALLFSLKQRYPELSQTSLDTCKIQYNRDVGKAVLESYSRVLEGLAFNIVAWIEDVLCADKSMTNREV* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1994 479 MobiDBLite consensus disorder prediction 58 81 - -
Tpr6g1994 479 ProSiteProfiles PRONE domain profile. 103 479 IPR005512 GO:0005085
Tpr6g1994 479 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 324 479 IPR038937 GO:0005085
Tpr6g1994 479 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 1 324 IPR038937 GO:0005085
Tpr6g1994 479 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 112 474 IPR005512 GO:0005085
Tpr6g1994 479 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 1 324 - -
Tpr6g1994 479 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 324 479 - -
Tpr6g1994 479 Gene3D PRONE domain, subdomain 1 106 345 - -
Tpr6g1994 479 Gene3D PRONE domain, subdomain 1 346 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1994 Tpr-Chr6 21616761 21620316 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1994 - - gmx:100806086 715.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1994 6 21616761 21620316 Tpr5g1275 5 25130452 25135204 PCT