Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1275 ATGGATAATTCATCAAATTTTGACTCAACTTCTTCAGTGGATCAAAATGATCATTTAATTAGTGAAACTCCTGAGTACTCACCATTCAGCGGCGATTCTTTCGCGTATTGTCGGAGTAATTCCGAGGTTTCGAACTTATCTGAGGCTATTGATGACAATAGTTATGCTAGTGACCCTCCACCTTCACCATGGATGAGTGTGAAACATGGAGCTGTTCTTTCAAGGTTAGGAATGAAGCAGAGAAAACATTCATTAGATGATAAATCTGATGATCTTGATCTATTGGAGACAGAACTTGAAATGATGAAGGAAAGATTTTCTAAGCTTCTTTTGGGGGAAGATATGTCTGGTGGTGGTAAAGGTGTTTGCACTGCAGTAACAATATCAAATTCCATTACCAATCTCTATGCAACTGTATTTGGACATAATTTGAAGTTAGAGCCTCTAAAGGCTGAGAAGAAAGCTATGTGGAAAAGAGAAATGAATTGTCTTATGTCAGTGTGTGATTACATAGTAGAATTTGCCCCAACTGCACAATACTTGGATGATGGTACAATTGTGGAGATGATGACAAGTAGACCAAGGGCAGATATTTATATCAACCTTCCAGCTCTACAGAAGCTTGACACAATGCTCATTGAAATCTTCGATAGTTTCCAGGATACTGAATTTTGGTATGCAGAACAAGGGAGCATATCAGGGAATTCTAACCGTAGTTCACATTCGAGTGCCGGTACGCATTCAAAGGCAGGCTCGTTTCGAATTATTGCTCAAAGAAAAGATGAGAAATGGTGGTTGCCGGTTCCTTGTGTTCACACTGGTGGCCTCTCTGATAAATCAAGGAAGCATTTGATTGAGAAAAGAGATTGTGCTAATCAAATTCATAAAGCAGCTATGGCAATAAATAGCAGTGTGCTTGCTGAGATGGATATTCCGGAAACATACATGGCAAATCTTCCTAAGAGTGGAAGATCAAGTCTAGGGGACGCAATTTATCGCTACATGCATTCTGCGGACAAGTTTTCACCCGGCAACCTTCTTGATTGCCTCAAAATAAGTACAGAACATGAAGCACTTGAACTAGCAGATAGAGTTGAGTCGTCAATGTACACATGGAGACGTAAAGCTTGCTTAAGCCATTCAAAATCTTCATGGAACAAAGTAAAGGAATTTATGGCTGACACTGGCCAAAGTGACAAAAACTTTGTCTTAGCTGAAAGAGCCGAGACTTTATTGTTTTTCTTGAAACAAAGATATCCTGAACTTTCACAAACCTCGTTGGACACATGCAAGATTCAATACAATCAGGATGTAGGAAAAGCAATACTAGAAAGCTACTCAAGAGTATTAGAAGGCTTAGCATTCAACATTGTTGCTTGGATTGAAGATGTTCTTTGCGCAGATAAATCAATGAGGAACTAA 1422 0.3917 MDNSSNFDSTSSVDQNDHLISETPEYSPFSGDSFAYCRSNSEVSNLSEAIDDNSYASDPPPSPWMSVKHGAVLSRLGMKQRKHSLDDKSDDLDLLETELEMMKERFSKLLLGEDMSGGGKGVCTAVTISNSITNLYATVFGHNLKLEPLKAEKKAMWKREMNCLMSVCDYIVEFAPTAQYLDDGTIVEMMTSRPRADIYINLPALQKLDTMLIEIFDSFQDTEFWYAEQGSISGNSNRSSHSSAGTHSKAGSFRIIAQRKDEKWWLPVPCVHTGGLSDKSRKHLIEKRDCANQIHKAAMAINSSVLAEMDIPETYMANLPKSGRSSLGDAIYRYMHSADKFSPGNLLDCLKISTEHEALELADRVESSMYTWRRKACLSHSKSSWNKVKEFMADTGQSDKNFVLAERAETLLFFLKQRYPELSQTSLDTCKIQYNQDVGKAILESYSRVLEGLAFNIVAWIEDVLCADKSMRN* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1275 473 Coils Coil 85 105 - -
Tpr5g1275 473 MobiDBLite consensus disorder prediction 1 25 - -
Tpr5g1275 473 ProSiteProfiles PRONE domain profile. 89 473 IPR005512 GO:0005085
Tpr5g1275 473 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 321 473 - -
Tpr5g1275 473 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 1 321 - -
Tpr5g1275 473 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 321 473 IPR038937 GO:0005085
Tpr5g1275 473 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 1 321 IPR038937 GO:0005085
Tpr5g1275 473 Gene3D PRONE domain, subdomain 1 343 473 - -
Tpr5g1275 473 Gene3D PRONE domain, subdomain 1 92 342 - -
Tpr5g1275 473 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 98 472 IPR005512 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1275 Tpr-Chr5 25130452 25135204 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1275 - - gmx:100785956 747.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1275 5 25130452 25135204 Tpr5g1275 5 25130452 25135204 ECH
Tpr6g1994 6 21616761 21620316 Tpr5g1275 5 25130452 25135204 PCT