Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1988 ATGGTTTCATTTGGTGATTCTAGTACTTATGCTGTCTTCTCTGTGTTCACGCTTCTTCTTACTGTTACTTTTGCTGGTGATATAGTACATCCTGATAAATATGCTCCTAAGAAACCTGGTTGTGACAACAACTTTGTTCTGGTCAAAGTTCCAACTTGGATTGACGGCGTAGAAAGTGGCGAGTATGTCGGTGTTGGTGCAAGATTTGGACCTACATTGGAGTCAAAAGAAAAGCGGGCAAACCATACTAGAGTTGCCATTGCAGATCCTCCTGATTGTTGTAGCAAGCCTAAGAATAAGCTTACCGGCGAGGTCATTTTGGTGCACCGAGGACAATGTAGTTTCACAACCAAGGCAAATATAGCTGAAGAAGCTGGTGCTTCAGCCATCCTGATTATAAATAACCGTGCAGGACTCTTCAAGATGGTCTGTGAAGATAACGAAACCGATATTGATATTGGAATACCTGCTGTCATGCTTCCACAAGATGCCGGTGAAACCTTGCAAAATTATATACAAAACAAGTCCACAGTGTCTGTGCAGTTATACTCTCCAAAACGTCCACAGGTCGATGTCGCAGAAGTATTTTTATGGCTTATGGCTGTTGGTACCATTCTCTGTGCTTCTTACTGGTCTGCCTGGACTGCCAGAGAAGGTGCTATCGAGCGAGAGAAGCTATTAAAGGATGATTCAAATGAGTATCTAAATACAGAGAATGCTGGTTCCAGTGGTTATGTGGAAATAAGTACAGTAGCAGCAGTTTCATTTGTTGTGATCGCTTCTTGTTTCTTGTTTATGCTTTACAAACTAATGTCGTACTGGTTTGTTGAAATTCTGGTGGTTCTTTTTTGCATTGGTGGGGTTGAGGGACTGCAAACTTGCTTGGTGGCTCTTTTATCATGTTTCAGCTGGTCTCAACATGCTGCACAAACATATGTGAAAATACCCTTCTTTGGTGCTGTATCATATCTCACGCTTGCTGTTACTCCCTTCTGCATAGTGTTTGCTGTGGTTTGGGGAGTTAAACGTCGTGTATCGTATGCTTGGATTGGTCAAGATATTCTTGGTATCGCTTTGATAATTACGGTTCTCCAGATTGTCCACATACCAAATCTCAAGGTTGGAACTGTTCTACTCGGCTGTTCCTTCGTATATGACATCGTCTGGGTGTTTATGTCTAAACTTGTGTTCCATGAGAGTGTGATGATAGTGGTAGCTCGTGGTGACAGAAGTGGAGAAGACGGCATCCCCATGCTGCTCAAGATACCGCGTTTATTCGATCCTTGGGGTGGTTACAGTATCATCGGTTTCGGGGACATAATCTTACCAGGCCTTCTAGTAGCATTTTCATTAAGGTATGATTGGTTAGCAAAGAGGAACCTTCGAGCAGGATACTTTTTGTGGGCAATGAGTGCTTATGGTTTAGGTTTGCTTGTCACATACTTAGCTTTGAATTTGATGGATGGGCATGGTCAACCAGCTTTGCTGTATATAGTTCCATTTACACTTGGAACCTTTTTGTCACTGGGAAAGAAGAGAGGTGAACTCGAAATCTTATGGACAAGAGGGCAACCAAAAATGCCTTGCCCTCACATTCGAGAGGATCATCAACCAGTGGATCAGTGA 1626 0.428 MVSFGDSSTYAVFSVFTLLLTVTFAGDIVHPDKYAPKKPGCDNNFVLVKVPTWIDGVESGEYVGVGARFGPTLESKEKRANHTRVAIADPPDCCSKPKNKLTGEVILVHRGQCSFTTKANIAEEAGASAILIINNRAGLFKMVCEDNETDIDIGIPAVMLPQDAGETLQNYIQNKSTVSVQLYSPKRPQVDVAEVFLWLMAVGTILCASYWSAWTAREGAIEREKLLKDDSNEYLNTENAGSSGYVEISTVAAVSFVVIASCFLFMLYKLMSYWFVEILVVLFCIGGVEGLQTCLVALLSCFSWSQHAAQTYVKIPFFGAVSYLTLAVTPFCIVFAVVWGVKRRVSYAWIGQDILGIALIITVLQIVHIPNLKVGTVLLGCSFVYDIVWVFMSKLVFHESVMIVVARGDRSGEDGIPMLLKIPRLFDPWGGYSIIGFGDIILPGLLVAFSLRYDWLAKRNLRAGYFLWAMSAYGLGLLVTYLALNLMDGHGQPALLYIVPFTLGTFLSLGKKRGELEILWTRGQPKMPCPHIREDHQPVDQ* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1988 541 Pfam PA domain 90 168 IPR003137 -
Tpr6g1988 541 PANTHER SIGNAL PEPTIDE PEPTIDASE 8 540 IPR007369 GO:0004190|GO:0016021
Tpr6g1988 541 PANTHER PA DOMAIN, PRESENILIN/SIGNAL PEPTIDE PEPTIDASE-RELATED 8 540 - -
Tpr6g1988 541 SUPERFAMILY PA domain 100 140 IPR046450 -
Tpr6g1988 541 Gene3D - 41 186 - -
Tpr6g1988 541 SMART psh_8 244 513 IPR006639 GO:0004190|GO:0016021
Tpr6g1988 541 Pfam Signal peptide peptidase 245 523 IPR007369 GO:0004190|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1988 Tpr-Chr6 21548920 21555334 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1988 K09597 - gmx:100808921 941.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1988 6 21548920 21555334 Tpr5g1291 5 25381046 25388901 PCT