Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1291 ATGGTTTCATTTGGAGGTGTATATAGTGTGGTTTATGTGTTCTTGTTTGGTGTGTCTTTGGTTTTGGCTGGTGATATTGTTCATCATGATGATGTTGCTCCTACAAGGCCTGGTTGTGAGAATAACTTTGTTCTGGTCAAAGTCCCAACATGGATTGACGGTGTGGAAAACGATGAATATGTTGGTGTTGGTGCAAGATTTGGTCCTACATTGGAATCAAAAGAAAAACATGCCAATCATACTAGAGTTGTCATTGCTGATCCTCCTGATTGTTGTAGCAAGCCTAAGAATAAGCTCACCAGTGAGATCATTTTGGTACACCGAGGAAAATGTAGTTTCACAACCAAAGCAAATATAGCTGATGAAGCCGGTGCTTCTGCCATCCTCATTATAAACTATCGTACAGAACTTTTCAAGATGGTTTGTGAGGAAAATGAAACCGATGTTGATATTGGAATACCTGCTGTTATGCTTCCACAAGATGCTGGATTAAACATTGAAAGACACATAAAAAATAACTCCATGGTGTCAATACAGTTATACTCTCCACTGCGTCCCTTGGTTGATGTTGCAGAAGTGTTTTTGTGGCTTATGGCTGTTGGTACCATTTTATGTGCTTCTTATTGGTCTGCTTGGACAGCCAGAGAAGCGGCTATTGAACAAGAGAAGCTTTTAAAGGATGCTTCAGATGACTATGTTGCAGAATGTGTTGGTTCTCGTGGTTATGTGGAAATCAGTACTACAGCAGCAGTTTTATTCGTTGTTCTTGCTTCTTGTTTCTTGGTTATGCTATATAAATTCATGTCGTTCTGGTTTGTTGAAGTTCTCGTAGTTCTATTTTGCATCGGTGGGATAGAGGGACTGCAAACTTGTTTGGTGGCTCTATTATCATGTTTCAGATGGTTTCAACATCCTGCACAAACATTTGTGAAGATACCATTCTTTGGAGCTGTTCCATATCTGACACTTGCTGTTACTCCCTTCTGCATAGTATTTGCGGTTGTTTGGGCAGTTAAACGCCATGCATCATATGCTTGGATTGGTCAAGATATTCTTGGTATCGCGTTGATAATTACAGTTCTTCAGATTGTTCGCATACCAAATCTCAAGGTTGGGACTGTTCTTCTCAGTTGTGCTTTCCTATATGACATATTATGGGTGTTCGTCTCTAAATGGTGGTTCCATGAGAGTGTGATGATAGTGGTAGCTCGAGGTGATAAGAGTGGAGAAGACGGTATTCCCATGCTTCTCAAGTTACCACGTTTGTTTGATCCTTGGGGTGGCTACAGCATCATCGGTTTTGGGGATATAATCTTACCAGGACTTCTAGTAGCATTTTCTCTAAGGTATGATTGGTTGGCAAAGAAGAACCTTCGAGCCGGATACTTCGTGTGGGCAATGACTGCTTATGGTTTAGGTCTCCTCGTCACATATGTGGCTTTAAACTTGATGGATGGACATGGCCAGCCAGCTTTGCTTTATATAGTCCCATTTACACTTGGCACTTTTCTGTCATTGGGAAAGAAGAGAGGTGATCTCAAGATTTTATGGACAAGAGGAGAACCAGAAAGACCTTGTCCTCATCATAGTCAAGAAGACAATTAA 1605 0.4093 MVSFGGVYSVVYVFLFGVSLVLAGDIVHHDDVAPTRPGCENNFVLVKVPTWIDGVENDEYVGVGARFGPTLESKEKHANHTRVVIADPPDCCSKPKNKLTSEIILVHRGKCSFTTKANIADEAGASAILIINYRTELFKMVCEENETDVDIGIPAVMLPQDAGLNIERHIKNNSMVSIQLYSPLRPLVDVAEVFLWLMAVGTILCASYWSAWTAREAAIEQEKLLKDASDDYVAECVGSRGYVEISTTAAVLFVVLASCFLVMLYKFMSFWFVEVLVVLFCIGGIEGLQTCLVALLSCFRWFQHPAQTFVKIPFFGAVPYLTLAVTPFCIVFAVVWAVKRHASYAWIGQDILGIALIITVLQIVRIPNLKVGTVLLSCAFLYDILWVFVSKWWFHESVMIVVARGDKSGEDGIPMLLKLPRLFDPWGGYSIIGFGDIILPGLLVAFSLRYDWLAKKNLRAGYFVWAMTAYGLGLLVTYVALNLMDGHGQPALLYIVPFTLGTFLSLGKKRGDLKILWTRGEPERPCPHHSQEDN* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1291 534 SMART psh_8 241 510 IPR006639 GO:0004190|GO:0016021
Tpr5g1291 534 Pfam Signal peptide peptidase 241 521 IPR007369 GO:0004190|GO:0016021
Tpr5g1291 534 PANTHER SIGNAL PEPTIDE PEPTIDASE 6 534 IPR007369 GO:0004190|GO:0016021
Tpr5g1291 534 PANTHER PA DOMAIN, PRESENILIN/SIGNAL PEPTIDE PEPTIDASE-RELATED 6 534 - -
Tpr5g1291 534 Pfam PA domain 89 166 IPR003137 -
Tpr5g1291 534 SUPERFAMILY PA domain 99 137 IPR046450 -
Tpr5g1291 534 Gene3D - 39 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1291 Tpr-Chr5 25381046 25388901 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1291 K09597 - gmx:100795197 972.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1988 6 21548920 21555334 Tpr5g1291 5 25381046 25388901 PCT