Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1986 ATGTCTATAAGTGGTTTAATTTCCAACAGAAACTTCACTTCTTTCATTGCTTCAGGAAATGTATATCAATTGAGAAAAGATCTATCACTTCAAAGAGGGAGCATTTCTGGCGTGCAACGTGGTGGCCAAATTCCAAACAATCCTTTTGCAAGAAGCAGAAGCAATATTGAACAAAGAGCTGTATATGGACTAGGAGTAAGAAAGCTTAGTAAGGTAAATAGAGCTTGTGTTCATTACAGGTCAGAGGAATATGACATTGATGAAACAAAGGTGGATCCCGTGGTATCTGATGAAGGAACAAGGGAAGAAGTTCTTTCGGAAGGAAATGGTGCACCGTTATCTCCTTGGTGGAAGCAGCTTCCTAAGCGCTGGCTTATTGTATTACTATGTTTTACAGCGTTTCTTCTATGCAACATGGACCGTGTAAATATGAGCATAGCTATACTTCCAATGTCACAAGAGTTTAACTGGAACAGTGCAACAGTTGGCTTAATTCAATCATCTTTTTTCTGGGGCTATCTACTTACTCAGATTCTTGGTGGCATATGGGCAGACAAACTTGGTGGGAAGGTAGTGCTAGGTTTTGGCGTTGTATGGTGGTCAATGGCAACAATTTTAACACCTATTGCTGCAAGAATTGGGCTCCCTTATTTGCTAGTTATGCGCGCCTTTATGGGAATTGGTGAGGGTGTAGCGATGCCTGCCATGAATAATATACTGTCCAAGTGGATTCCAGTTTCGGAGAGAAGCCGATCACTTTCACTGGTATATAGTGGCATGTACCTTGGTTCTGTGGTAGGTTTGGCATTCTCACCTTTCCTAATCCAAAACCTTGGCTGGCCATCCGTGTTTTACTCATTTGGATCCCTTGGAAGTATCTGGTTTGCCTTTTGGTTGAGAAAAGCATATAGCTCACCAAAAGATGATCCGGATCTCAGGCCTGAGGAAAAAAGGCTCATTCTTGATGGCGGCGTATCAAAAGCACCAGTTTCAGACATTCCATGGAAACTAATTTTATCAAAAGCACCAGTTTGGGCTCTTATAATCTCTCATTTCTGCCACAATTGGGGGACATTTATTCTATTAACATGGATGCCTACTTATTACAATCAGGTTCTGAAGTTCAACCTCACCGAATCTGGTCTCTTATGCGTTCTTCCGTGGTTAACCATGGCTATTTTTGCAAATATCGGAGGGTGGATAGCTGACACGTTAGTTAGCAAAGGCGTTTCCATAACAGCTGTTCGAAAGATCATGCAATCGATCGGGTTTCTGGGTCCTGCCTTTTTTTTGACACAACTAAGCCATGTCAAAACACCTGCCATGGCAGTATTGTGCATGGCGTGCAGTCAGGGATCTGATGCGTTCTCACAATCTGGTCTTTATTCCAATCACCAAGACATTGGACCGCGCTATGCTGGCGTATTGCTGGGACTATCGAACACCGCAGGTGTGCTTGCAGGTGTCTTTGGCACAGCTGCAACTGGATACATACTCCAAAGAGGTTCTTGGAATGATGTGTTTAAGGTTTCTGTTGCATTGTACATAATAGGCACATTGGTATGGAATATCTTTTCAACTGGGGAGAAGATTCTTGACTAA 1602 0.427 MSISGLISNRNFTSFIASGNVYQLRKDLSLQRGSISGVQRGGQIPNNPFARSRSNIEQRAVYGLGVRKLSKVNRACVHYRSEEYDIDETKVDPVVSDEGTREEVLSEGNGAPLSPWWKQLPKRWLIVLLCFTAFLLCNMDRVNMSIAILPMSQEFNWNSATVGLIQSSFFWGYLLTQILGGIWADKLGGKVVLGFGVVWWSMATILTPIAARIGLPYLLVMRAFMGIGEGVAMPAMNNILSKWIPVSERSRSLSLVYSGMYLGSVVGLAFSPFLIQNLGWPSVFYSFGSLGSIWFAFWLRKAYSSPKDDPDLRPEEKRLILDGGVSKAPVSDIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLLCVLPWLTMAIFANIGGWIADTLVSKGVSITAVRKIMQSIGFLGPAFFLTQLSHVKTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWNDVFKVSVALYIIGTLVWNIFSTGEKILD* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1986 533 PANTHER SOLUTE CARRIER FAMILY 17 36 533 - -
Tpr6g1986 533 CDD MFS_SLC17A9_like 127 526 IPR044777 -
Tpr6g1986 533 Gene3D MFS general substrate transporter like domains 330 531 IPR036259 -
Tpr6g1986 533 Pfam Major Facilitator Superfamily 130 491 IPR011701 GO:0022857|GO:0055085
Tpr6g1986 533 PANTHER ANION TRANSPORTER 4 36 533 - -
Tpr6g1986 533 SUPERFAMILY MFS general substrate transporter 112 525 IPR036259 -
Tpr6g1986 533 Gene3D MFS general substrate transporter like domains 121 310 IPR036259 -
Tpr6g1986 533 ProSiteProfiles Major facilitator superfamily (MFS) profile. 126 530 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1986 Tpr-Chr6 21529118 21534463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1986 1 533 Organic Solute Cotransporters AT4G00370 75.181 0.0 823
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1986 K08193 - gmx:100784401 870.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1986 6 21529118 21534463 Tpr5g1299 5 25461536 25467050 PCT