Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1299 ATGGCTATGAGCGGTTTGATTTCTAACCGCAATTTTGGTTCCTTCGTTACCTCAGGAAATTCGTATAGATCACAAAAGGATTTGTCACTTCAAAGAGGGGGGATTTCTGTTTCGGGTGCACCGGTTACACAATATGGTGGCTGGATTGTGAAGGTTCCTCTTTCAAGATGCCAGAATGCAATGCATTCTCATATTGTTTCTTCTTTGGAAGAGAGACTTTCAAAACAAATACAAACATTCGATAACAAAAGGGAGATTTTTTCTCCATTATCCCGACAATCCAGCTGCTGCTCAAACTTCAAATTAAAAGCTTGCAAAAGAAGACATTCTTACCTTTCTTCAGCTCCCTTTAGCAGTAGCTATATCGAACAATTTGGTTTGAGCAAAAGAAAGCACCGACAGCCTGAGGTTGGTAAAGCAAATAAGTTTCGTCTTTGTTACAAGTCTGAGGAGTATGAATTTGCAGAACCAAATATAGATAAGCTGAAATCAACTGAAGTGACCGGTGAAGCCATTCTTTTGGAAGGAAATCTGCATCAAATATCTCCATGGTGGCAGCAGTTTCCTAAGCGTTGGGTTATTGTACTGCTATGTTTTACAGCATTTCTCCTTTGTAATATGGATCGCGTCAATATGAGCATAGCAATACTGCCGATGTCTCAAGAGTTCAACTGGAACAGTGCAACAGTTGGCCTCATTCAGTCCTCTTTTTTCTGGGGCTATCTACTTACACAGATTGTTGGTGGCATTTGGGCAGACAAAGTTGGTGGGAAGCTAGTACTAGGTTTTGGAGTTATATGGTGGTCAATTGCAACAGTTTTAACTCCTGTTGCTGCAAAACTTGGGCTGCCATATCTGCTTGTTATGCGTGCCTTTATGGGAATCGGAGAGGGTGTTGCGATGCCTGCAATGAATAATATACTTTCCAAGTGGATTCCAGTATCGGAGAGAAGCAGATCACTTGCGCTAGTATATAGTGGAATGTACCTTGGTTCTGTCACAGGCTTGGCATTCTCGCCTTTTCTAATTCACAAATTCGGGTGGCCATCTGTGTTTTACTCATTTGGATCACTTGGAAGTATCTGGTTTGCATTGTGGTCGAGAAAAGCATATAGCACGCCAAAAGATGATCCAGATCTTGGGGCGGAAGAGAAAAGGCTCATACTTGGAGGCAGCGTATCAAAAGAACCTGTGACAGTTATTCCTTGGAAATTGATTTTATCGAAAGCACCTGTTTGGGCTTTAATAATCTCTCACTTCTGCCACAATTGGGGAACATTTATTCTGTTAACCTGGATGCCTACATACTACAATCAGGTTCTGAAGTTCAACCTCACGGAATCGGGGCTCTTATGTGTCCTTCCATGGTTAACCATGGCCATTTTTGCAAATATAGGAGGTTGGATTGCTGACACACTTGTGAGCAAAGGCCTTTCCATAACAACTGTTCGAAAGATCATGCAATCAATAGGGTTTCTAGGTCCTGCATTTTTTCTTACACAGTTAAGTCATGTCAGAACACCCGCCATGGCAGTACTGTGCATGGCTTGCAGTCAGGGATGTGACGCATTCTCACAATCTGGTCTATATTCCAATCACCAAGACATTGGACCACGCTATGCTGGAGTTTTGCTGGGACTATCGAATACGGCAGGAGTGCTTGCCGGTGTCTTTGGTACAGCTGCTACTGGATACATACTCCAACGAGGTTCATGGAACGATGTATTTAAAGTCTCTGTTGTATTGTACTTAATTGGCACGTTGGTCTGGAATATCTTTTCAACTGGTGAAAAAATTCTCGACTGA 1806 0.4236 MAMSGLISNRNFGSFVTSGNSYRSQKDLSLQRGGISVSGAPVTQYGGWIVKVPLSRCQNAMHSHIVSSLEERLSKQIQTFDNKREIFSPLSRQSSCCSNFKLKACKRRHSYLSSAPFSSSYIEQFGLSKRKHRQPEVGKANKFRLCYKSEEYEFAEPNIDKLKSTEVTGEAILLEGNLHQISPWWQQFPKRWVIVLLCFTAFLLCNMDRVNMSIAILPMSQEFNWNSATVGLIQSSFFWGYLLTQIVGGIWADKVGGKLVLGFGVIWWSIATVLTPVAAKLGLPYLLVMRAFMGIGEGVAMPAMNNILSKWIPVSERSRSLALVYSGMYLGSVTGLAFSPFLIHKFGWPSVFYSFGSLGSIWFALWSRKAYSTPKDDPDLGAEEKRLILGGSVSKEPVTVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLLCVLPWLTMAIFANIGGWIADTLVSKGLSITTVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGCDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWNDVFKVSVVLYLIGTLVWNIFSTGEKILD* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1299 601 Gene3D MFS general substrate transporter like domains 189 378 IPR036259 -
Tpr5g1299 601 SUPERFAMILY MFS general substrate transporter 180 593 IPR036259 -
Tpr5g1299 601 ProSiteProfiles Major facilitator superfamily (MFS) profile. 194 598 IPR020846 GO:0022857
Tpr5g1299 601 PANTHER ASCORBATE TRANSPORTER, CHLOROPLASTIC 63 601 - -
Tpr5g1299 601 Pfam Major Facilitator Superfamily 198 559 IPR011701 GO:0022857|GO:0055085
Tpr5g1299 601 PANTHER SOLUTE CARRIER FAMILY 17 63 601 - -
Tpr5g1299 601 CDD MFS_SLC17A9_like 195 594 IPR044777 -
Tpr5g1299 601 Gene3D MFS general substrate transporter like domains 406 598 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1299 Tpr-Chr5 25461536 25467050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1299 1 601 Organic Solute Cotransporters AT4G00370 70.930 0.0 826
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1299 K08193 - gmx:100793618 980.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1299 5 25461536 25467050 Tpr5g1299 5 25461536 25467050 ECH
Tpr6g1986 6 21529118 21534463 Tpr5g1299 5 25461536 25467050 PCT