Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1975 ATGACTTTTTTCAATTTGATTCTCAGTGTTATGCTTCTCTTTATCCTACTCTCTTCAAATGGCGAACCCATTACTAAAGGTGAAACCTTTATTGTTTCAAGCTTCAGTTACCCTCACACTAGGCTCAGACCCTTTGATCTACGCTATATCAGAGTTGACTTGCCACCATGGTTTTCTGCAATGTCTATTGCACTGAACTCAGATGTAGACCTTGATGTGTCTAGAATTGAAAGGGTTCCGATGAGCACACTGCCAATAATATGCTTTAGAGATGGAGGTCCTCCACAGCCAGATGCCTTAAACATAACATTGAAAGACTCAGCCGTCTCAGGGATAAATGGTTTAGATGTGGAGCAGTGCTTTCCTATGCAGAAAAATATCACTATGAAACTGACAAACAACCAGATATCTCCAGGTGTTTGGTTCATTGGTCTTTTCAATGGTATTGGACCTACAAGGACACAGTCAAAGATGATTATCCGAGGTCCAGCATACTCCTTCGCTGCCAATATAACTGTGGAAGCATGTACAAATTCAATGATGATGGGAGATTTCTGTAATAGTCCTGTTTATCCATTTTCATGCACAACTTCTGATGTCAATAATGCTTTGAAAGCTACGACGGTGATCAAGCCAGTGTTGGAAAATTTGATGACCTGCAAAAGTAATTTTAAAACTTCCTGTGCTCATGAAGGTGTACCAAACGTCTTCTCCTTGGATATAATAAATGTGGCAGAAGCATTTACTGTTACAGCAAGTGATATCAAATTCAATATTACGCCTTCAAACAATACATCTGGTGCAAATGATGTTAGTTTAATGTGTTTTGTTCGCCATGGTTCAATGCCTTCAGTGACTTCGTATGATTACTCCAGTGATTTAAAGAAAGTGCCGTTGGTTATTCATTCACCATTAATTGGTCGTTGGTACATTACTATCGTACCAATCAATCTTATAAAGATGCAGGATAGTAATGTAACGGTTTGCTATTCAGTCAAATCTCACGTGCTTCAATGCCCACTTGGGAAGACAGGACCAAATTGTACAATGGATATCTACATGCTTCAGACATATGTACGGAGAGGTCCAACTCCCTTTGAATCATACTATTTACCGGTCGGTGCTGGAACATCTTATGCTTCTGCCAATTTCCCTCTTGAACCACTTTTGAGTAACTCGTCATACAATGGAGAACCTGGTAACATTTGGACTTACTTACTTTTAGACATTCCTCGTGGTGCAGCCGGAGGAAATATTCACGTACAACTATCCTCGGATGTGAAGATCGATTATGAAGTTTACGCTAGATTTGGTGGATTACCATCACTTATTAGCCGGGACTATTATTATGCTAACAAGACAATGAGAAGCAATACATCTATGTTTTTCATGCTATACGATTCAAGTGATGACAAGATCAATTTCTATATTATGTATGCTAGAGAAGGAACATGGGGTTTTGGTCTTAGACATCTCAATACCAGCATCGTTCCTGCTAAAGGCCCAACTGTCATGTCTCTTTCGCTTGAACGGTGCCCTAAACATTGTTCCTCTCACGGGGACTGTAAATTTTCTTTTGATGCAAGTGGCTTGACATCATACAGCTTTTGTTCTTGTGATCGAAACCATGGAGGCATCGACTGTAGCGTTGAAATTGTAACACATCAAGGGCACGTACGACAATCTTTTTTTCTCATTGTCTCCAATGCTGCGGCCATACTTCCTGCCTATTGGGCCCTTCGGCAGAAGGCATTAGCAGAATGGGTTTTATTCACATCCAGTGGAATTGCTAGCGGACTATATCATGCTTGTGACGTAGGTGCCTGGTGTGCATTGAGCTTTAATGTCTTGCAGTTCATGGATTTCTGGCTCTCTTTCATGGCTGTGATTAGCACTTTTCTTTATCTAGCTACCATTGATGAAGTATTGAAGAGAGCAATCCACACAGCTGTAGCTATCCTTACTGCCCTAATGGCCGTAACAAATGCAACTCGGTCTTCGAATGTTGTTCTTGTGATGGTGATTGGTGCTCTTGGTCTCCTTATTGGATGGGTTATAGAGATGTCAACAAAGTATAGGTCCCTTTCCTTTTCAGTTAGATTCTCCTTTGATTTCTCTCATAGTTTGCACGTGATAAAGCGATGGCTATGTAATCTTGTTGGGTCACTTCTAAGACGGTACCACTGGCCTTTTGCCTTAGCTGGTTTTTCTGCACTGTCAATGGCAATAGTGAGCTGGACACTCGAAACCAGTGAAAGTTACTGGTTTTGGCATAGCTTTTGGCATATTACAATATACACATCTTCTTTCTTCTTCCTTTGTTCAAAAGCAAATATTGTGGATAGTGAGAATCAACTACCCGCAAATGGAAACTATGAACTGACCCATCAGGATTCACTTCCAAGAAATGGTTAA 2415 0.4058 MTFFNLILSVMLLFILLSSNGEPITKGETFIVSSFSYPHTRLRPFDLRYIRVDLPPWFSAMSIALNSDVDLDVSRIERVPMSTLPIICFRDGGPPQPDALNITLKDSAVSGINGLDVEQCFPMQKNITMKLTNNQISPGVWFIGLFNGIGPTRTQSKMIIRGPAYSFAANITVEACTNSMMMGDFCNSPVYPFSCTTSDVNNALKATTVIKPVLENLMTCKSNFKTSCAHEGVPNVFSLDIINVAEAFTVTASDIKFNITPSNNTSGANDVSLMCFVRHGSMPSVTSYDYSSDLKKVPLVIHSPLIGRWYITIVPINLIKMQDSNVTVCYSVKSHVLQCPLGKTGPNCTMDIYMLQTYVRRGPTPFESYYLPVGAGTSYASANFPLEPLLSNSSYNGEPGNIWTYLLLDIPRGAAGGNIHVQLSSDVKIDYEVYARFGGLPSLISRDYYYANKTMRSNTSMFFMLYDSSDDKINFYIMYAREGTWGFGLRHLNTSIVPAKGPTVMSLSLERCPKHCSSHGDCKFSFDASGLTSYSFCSCDRNHGGIDCSVEIVTHQGHVRQSFFLIVSNAAAILPAYWALRQKALAEWVLFTSSGIASGLYHACDVGAWCALSFNVLQFMDFWLSFMAVISTFLYLATIDEVLKRAIHTAVAILTALMAVTNATRSSNVVLVMVIGALGLLIGWVIEMSTKYRSLSFSVRFSFDFSHSLHVIKRWLCNLVGSLLRRYHWPFALAGFSALSMAIVSWTLETSESYWFWHSFWHITIYTSSFFFLCSKANIVDSENQLPANGNYELTHQDSLPRNG* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1975 804 Pfam Protein of unknown function (DUF3522) 558 763 IPR021910 GO:0016021
Tpr6g1975 804 PANTHER TRANSMEMBRANE PROTEIN-LIKE PROTEIN 6 803 - -
Tpr6g1975 804 ProSitePatterns EGF-like domain signature 1. 537 548 IPR000742 -
Tpr6g1975 804 PANTHER FIVE-SPAN TRANSMEMBRANE PROTEIN M83 6 803 IPR021910 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1975 Tpr-Chr6 21396634 21406209 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1975 - - gmx:100778959 1317.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1975 6 21396634 21406209 Tpr5g1318 5 25747179 25755605 PCT