Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1318 ATGTCTTTCAATTCGATTCTCTGTTGTCATCAAACACTGATTCTCCTCAGTGTTTTGTTACTTTTCACTTCTTCACATAATTATAATAATCTCTGCTCTGCAAACGATGAACTAAATAATAGCACTCATGGTTTCTTCACAATTTCCAGTTTCACCTACCCTCAAACTACTCTTAGCCCCTTTGATTTTCATTATATTAGAGTTGATATACCGCCGTGGTTTTCTGCAGTCTCCATAGCATTGAATTCAGATGTAGACCTTGATGTTACGAAAATCGAAAGGGTTCCAAAAAGATCACTGCCAATAATATGCTTTAGAGATGGAAGTCCCCCTCTACCAGATGCTTTAAACACATCTCTGAAATATTCAGCTATCTCAGGAATAAATGGTCTTGATACGGAGCAGTGCTTTCCTATGGAGAAAAATATCACTATGAAATTGACTAATGAACTGATATCTCCAGGTGCTTGGTACATTGGTCTTTTCAACGGCATCGGAGATGCAAGAACACAATCAAGGATGATTATTCGAGGCACATCGTACTCCTTTAGTGCCAATATAAGTGTGGAAGCTTGCACAAATTCGATGATGAGAGGGGAGTTCTGTAACAGCACCGTCAATCCACTTTCATGCACAACATCTGATGTCTATAATTCTACGAAGGCGGCTACACTGAAGAAGCCAACGATTGAAAATGCGGTGACCTGCAAAAGTAACTTTGAAACTTTGTGTGTTCAGGAAGGCGTACCTAACTTATATTCCTTGGATATTAATAATGTGGTCGAAGAATTGACCATTACGGCTGAAAATATCAGATTCAATATTACACCTTCAAGTAACGCTTCTAATGCAAGTGATGTTAATTTATTGTGTTTTGCTCGCCACGGTGCAATACCTGCAAATAGTTTGTATGATTATTCCAGTGATTTAAATAAAGCCCCTCTGGTTATTCGTTCTCCACTGATCGGGCGTTGGTACATTAGTGTATTACCGGTTAATCTTACAAAAAAGTTTGGAGAGACTCATGACGGTGATGTAAAAGTTTGCTATTCTCTTGAATCACAAATGCTTCAGTGTCCACTTGGAAAAGCTGGACCAAATTGTACAACGAGTAGCTATGCACTTCAGACAGTTCTAAGGACAAGTCCAATCCCGTTTGAATCATATTATTTGCCTATTGGTGAAGGAGAATATTCTTCTGCCAATTTTCCTCTCGAACCACTTTTAAATAACTCATCAAACTTAGGAGAATCCAATGACATTTGGACTTATTTTACTTTCGACATTCCTCGTGGTGCAGCTGGCCGAAACATTCACATACGGCTATCCTCAAATACGAAGATCAATTACGAAGTTTATGCGAGATTCGGTGGATTGCCTTCTGTTGATATATGGGACTATTATTATGCTAACAAGACACAGAAAAGCGACCAATCAATGTTTTTCATGCTATATGATTCGAACGATAATAATGTTGATTTTTACATTATTTATGCTAGAGAAGGAACTTGGAGTTTTGGTCTAAGACATGTCAATATTAGCAGTGATTCTTTGAAACAGAAAACTATCATGTCTATTTCACTTGAAGGATGCCCGAAACAATGCTCCTCTCATGGAACCTGTAAATCTTCTTTTGATGCTACCGGATTGACGTCATACAGCATCTGTTCTTGTGATCGAAACCATGGTGGCTTTGACTGTAGCGTCGAAATTGTGTCACATAAAGGGCACATACTTCAATCAGTTTTTCTGATAGGATCAAATGCTGCAGCCATACTTCCTGCCTTTTGGGCGCTTCGACAGAAGGCGTACGCGGAATGGGTTATATTCACAGCCAGTGGAATTTCGAGTGGAATATATCATGCATGCGACGTAGGGACCTGGTGTGCATTGAACTTCGGTGTTCTACAGTTTATGGACTTCTGGCTCTCTTTCATGGCCGTGATTAGCACTTTTGTGTATCTAGCTACCATCGATGAAGTATATAAGAGGGCAATCCACACAACTGTGTTTATCTTTACTGCTCTCATGTCGATAACTAATGCAACCAGGTCTTCAAATATTGTTCTTGTGATTGTGATTGGGGCTCTTGGCCTTCTTATTGGATGGTTGATAGAAATGTCAACAAAGTATAGGTCCCTTTCATTTTCATTTTCATTTTCATTTGGATTCTCGCCAAATTTCCTTCAAAGTTTGTTAACTATAAAGCTATGGTTCTATAATCTTGTGAAGACACTTTTGAGACGGTTCCATTGGGGTTTGATATTGGCCGGATTTGCCGCATTATTCATGGCAGGAGTAAGCTGGATGCTTGAAACAAGTGACAGCTACTGGATTTGGCATAGCTTTTGGCATGCTACAATATACACATCTTCTTTCTTCTTCCTTTGTTCAAAAGCAAATATTGTTGATGCTGAGAATCAGTTACCTAGAAGTGAAACCTATGCTCTAACTCGTCAGAATTCATTTTCGAGAGAATAG 2481 0.3902 MSFNSILCCHQTLILLSVLLLFTSSHNYNNLCSANDELNNSTHGFFTISSFTYPQTTLSPFDFHYIRVDIPPWFSAVSIALNSDVDLDVTKIERVPKRSLPIICFRDGSPPLPDALNTSLKYSAISGINGLDTEQCFPMEKNITMKLTNELISPGAWYIGLFNGIGDARTQSRMIIRGTSYSFSANISVEACTNSMMRGEFCNSTVNPLSCTTSDVYNSTKAATLKKPTIENAVTCKSNFETLCVQEGVPNLYSLDINNVVEELTITAENIRFNITPSSNASNASDVNLLCFARHGAIPANSLYDYSSDLNKAPLVIRSPLIGRWYISVLPVNLTKKFGETHDGDVKVCYSLESQMLQCPLGKAGPNCTTSSYALQTVLRTSPIPFESYYLPIGEGEYSSANFPLEPLLNNSSNLGESNDIWTYFTFDIPRGAAGRNIHIRLSSNTKINYEVYARFGGLPSVDIWDYYYANKTQKSDQSMFFMLYDSNDNNVDFYIIYAREGTWSFGLRHVNISSDSLKQKTIMSISLEGCPKQCSSHGTCKSSFDATGLTSYSICSCDRNHGGFDCSVEIVSHKGHILQSVFLIGSNAAAILPAFWALRQKAYAEWVIFTASGISSGIYHACDVGTWCALNFGVLQFMDFWLSFMAVISTFVYLATIDEVYKRAIHTTVFIFTALMSITNATRSSNIVLVIVIGALGLLIGWLIEMSTKYRSLSFSFSFSFGFSPNFLQSLLTIKLWFYNLVKTLLRRFHWGLILAGFAALFMAGVSWMLETSDSYWIWHSFWHATIYTSSFFFLCSKANIVDAENQLPRSETYALTRQNSFSRE* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1318 826 Pfam Protein of unknown function (DUF3522) 577 785 IPR021910 GO:0016021
Tpr5g1318 826 ProSitePatterns EGF-like domain signature 1. 556 567 IPR000742 -
Tpr5g1318 826 PANTHER FIVE-SPAN TRANSMEMBRANE PROTEIN M83 14 825 IPR021910 GO:0016021
Tpr5g1318 826 PANTHER TRANSMEMBRANE PROTEIN-LIKE PROTEIN 14 825 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1318 Tpr-Chr5 25747179 25755605 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1318 - - gmx:100777848 1252.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1975 6 21396634 21406209 Tpr5g1318 5 25747179 25755605 PCT