Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1623 ATGGCTGATACCACCAAATATGTTCCCATAGCTACTACCACTGGAAATAATAACTTACACAAATTAGACTTGAAAAATCTCTTCACCATTCTCAAAACTAAAACCACAATTGCTTTTGCTTATGCTTTTATGCTTGTTTTCATTGCTTTCACTATTTTCTTAGCTTTTTCATCTTCTCCAGCAATTTCCACTACTACACCTTCTTCCACTTCTCAATTTTCTTCAATTTTTGAATACTTTTTCCCAAACAACACCACTACACTATCACAATCACAACCACACAACACCACTACCAATCTTCAATATCCTTTTGATCCATTTCAAAATAAAACTTCTATTTCTAGATCTACCAATGTAACTACTTTTTCTCAACCTTCAAATCAAGATGATGCAGTTTCAGTTTCAGTTTCAGTTCCAACCACAAACAACACCATAATCACTAATTCCACTTCACAAGATGATGCAGTTTCAGTTTCAGTTTCAGTTCCAATCACAAACAACACAATAATCAACAATTCTACTTCACAAATTGTGAAAAATCACACTTCCTCCAATTTTGATGAAACCACAAAAGCCGTGAATTCAAATCATACAACAAATGCTACTTCACAAATTGTGAAAAAGGAGGATTCATCCTCTACTGGTGAAGCAAAAACCAAAGCTATGAATGCTACTACTGTTGTTGAAGGAGTTTCAATTCTTCCTAACAAGAATTTGAGTTCTAATTCTTCATTGAAAGGTGTTGATTTGAACAATTACACTCAATCACTTGCTAAGAAAAAGAACAACGGGAACAACAAATATGCTGAGTTGATGGAATCTTTGATGAATTGTGATTTTTTTGATGGTGAATGGGTTAAAGATGATTCTTATCCTCTTTATAAACCAGGTTCTTGTTCATCAATAATTGATGAACAATTCAATTGTATTCGAAATGGAAGACCTGATAAAGATTATCAGAAATATAAATGGAAACCTAAGGGTTGCACCCTCCCAAGGTTGGATGGACATAAATTGCTTGATTTGTTGAGAGGCAAGAGACTGGTTTTTGTTGGTGATTCTCTGAATAGGAATATGTGGGAATCACTTATTTGTGTACTAAGAAATTCTGTGAAAAATAAAAAGAAAGTTTATGAAGCAAATGGAAGAGTCCATTTTAGAGGAGAAGCTTCTTATTCATTTATATTCAAGGATTATAACTTCTCTGTGGAGCTTTTTGTGTCACCATTCTTAGTTCAAGAGTGGGAAATGCCTGATAAAAATGGAACAAAGAAGGAAACGCTTCGTCTTGATTTAGTTGGTCAATCTTCAGATCAGTATAAAGATGCAGATATCATTGTCTTTAATACTGGTCACTGGTGGACTCATGATAAAACTTCTAAAGGGAAGGGCTATTACCAAGAAGGTAGCCATGTCTATGATGAATTGAATGTTCTTGAGGCGTTCCGAAGAGCTATAACAACTTGGGGCAAGTGGGTTGATGCCAAAGTAAATCCATCCAAGTCCTTAGTATTGTTTAGAGGCTATTCGGCTTCCCATTTCAGTGGTGGGCAATGGAATTCGGGTGGAGCATGTGACCATGAAACTGCTCCCATTGACAACGAGAAGTACCTAACAGAGTACCCGCCTAAGATGAGGGTGTTGGAGAAGGTGCTTAAGTATATGAAAACACCTGTATCGTACCTAAATATCACTAGGATGACAGATTTTCGAAAGGACGGTCATCCTTCAGTATACAGGAAGCAGAATCTGTCACCTGAAGAAAGAAAATCGCCATTGAGATACCAAGACTGCAGTCATTGGTGCCTTCCGGGTGTTCCTGATGCGTGGAATGAGATTCTCTATGCTGAAATTCTAATGAGAGAGTACCGAAATAAGCAGCAGCAGAAGAGAACATAG 1899 0.367 MADTTKYVPIATTTGNNNLHKLDLKNLFTILKTKTTIAFAYAFMLVFIAFTIFLAFSSSPAISTTTPSSTSQFSSIFEYFFPNNTTTLSQSQPHNTTTNLQYPFDPFQNKTSISRSTNVTTFSQPSNQDDAVSVSVSVPTTNNTIITNSTSQDDAVSVSVSVPITNNTIINNSTSQIVKNHTSSNFDETTKAVNSNHTTNATSQIVKKEDSSSTGEAKTKAMNATTVVEGVSILPNKNLSSNSSLKGVDLNNYTQSLAKKKNNGNNKYAELMESLMNCDFFDGEWVKDDSYPLYKPGSCSSIIDEQFNCIRNGRPDKDYQKYKWKPKGCTLPRLDGHKLLDLLRGKRLVFVGDSLNRNMWESLICVLRNSVKNKKKVYEANGRVHFRGEASYSFIFKDYNFSVELFVSPFLVQEWEMPDKNGTKKETLRLDLVGQSSDQYKDADIIVFNTGHWWTHDKTSKGKGYYQEGSHVYDELNVLEAFRRAITTWGKWVDAKVNPSKSLVLFRGYSASHFSGGQWNSGGACDHETAPIDNEKYLTEYPPKMRVLEKVLKYMKTPVSYLNITRMTDFRKDGHPSVYRKQNLSPEERKSPLRYQDCSHWCLPGVPDAWNEILYAEILMREYRNKQQQKRT* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1623 632 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 331 616 IPR026057 GO:0016740
Tpr6g1623 632 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 25 625 - -
Tpr6g1623 632 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 25 625 IPR029962 GO:0016413
Tpr6g1623 632 MobiDBLite consensus disorder prediction 189 221 - -
Tpr6g1623 632 Pfam PMR5 N terminal Domain 277 329 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1623 Tpr-Chr6 17401340 17405202 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1623 - - gmx:100811425 752.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1623 6 17401340 17405202 Tpr6g1623 6 17401340 17405202 ECH
Tpr6g1623 6 17401340 17405202 Tpr1g4508 1 53273820 53277473 PCT