Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4508 ATGGCTGAATCCACCAAACATGTTCCTAACTTAAACATCAAAAGCCTCTTTTCAATTCTCAAAACCAGAAGAGCAACCACTTTTGCTTATGCTTTTATGTTTGCTTTTGTTTCTTTAACTGTTTTCTTAGCCTTTTTTCCTTCTTCAAATGCTTCATCTCCTTGGTTCAATAACATATTCACCACAAAAACTTCCATTTCTGATTCTTATAAATCTCAACTTTCTAACATTTTCTCATTCTTTTACCATAACACAACCACTTCTTCATCTTCTACTTTTAGCAACACTTCTTCATCTTCTTCACCTTTTAGCAACACTTCTAGATCTAGCAATAACAACACTTCTCAATCTTCTAACACAAATACAAAAACATTCAAAGCAACCACTTTTGGAAACAAAACTCAAAACCCATCTCAAGATTCTGTTCCAACCACCAATCAAACCTCTCATCAAGTTTCTGATGAAACTAAACATCAGAAGAAAACAAATCAAACTGCAAATAAGGATGTTGTGTTAAGTAATAATCAAACTGCTTTGAAGGTGAAGGATGAGATTCATATGATGGAATCTTTGATGAAGTGTGATTTTTTTTATGGAAAATGGATTAAGGATGAATCTTATCCTCTTTATGAACCTGGTTCTTGCAATTTGATTGATGAACAGTTTAATTGTATTAACAATGGAAGACCTGATAAAGATTATCAGAAATATAAGTGGCAACCTAAAAGGTGTACCCTCCCAAGGTTGGATGGAAAAAGAATGCTTGATTTGCTGAGAGGAAAGAGACTTGTTTTTGTTGGTGATTCCATCAATAGGAATATGTGGGAATCTCTTATTTGCATCCTCAGAAACTCTGTGAAAGATAAAAGTAATGTTTTTGAAGCAAATGGAAGAAGCCATTTTAAAGGAGAATCCTCTTATTCATTTGTATTCAAAGATTACAACTTCTCGGTCGAGCTTTTTGTATCACCGTTCTTAGTTCAGGAGTGGGAAACTCTAGTTAAGAATGGAACGAAGAAGGAAACACTTCGGCTTGATTTGGTGGGTAGATCGTCGAATCAATACAAAGATGCAGATATAATCATCTTCAATACCGGTCATTGGTGGACTCATGATAAAACTTCTAAAGGGAAGGACTATTACCAAGAAGGTAGTCATATCTATAATGAATTGAATGTTTTGGAGGCATTTCGAAAAGCTATAACAACTTGGAGCAGATGGGTTGATGCTAACATAAATACATCCAAGTCTATGGTCTTCTTCAGAGGCTATTCTTCTTCACATTTTAGTGGAGGGCAATGGAATTCAGGTGGACAATGTGACAGCGAAGTCATCCCGATCAAGAACGAAAAATACTTGAGGCAATACCCTCCTAAGATGAGAGTTTTGGAAAAGGTACTGAGGAATATGAAGACACGTGTCACTTACTTAAACGTCACGAAAATGACAGATTTCCGTAAAGATGGTCATCCTTCTATCTACAGAAAGCAAAACCTATCATCAGACGAAAGGAAATCGCCGTTGATGTACCAAGACTGCAGCCATTGGTGTTTGCCTGGTGTTCCTGATACATGGAATGCAATTCTCTATGCAGAGCTTCTAATAAAACAATATCAAAATCAGCATTGA 1629 0.3591 MAESTKHVPNLNIKSLFSILKTRRATTFAYAFMFAFVSLTVFLAFFPSSNASSPWFNNIFTTKTSISDSYKSQLSNIFSFFYHNTTTSSSSTFSNTSSSSSPFSNTSRSSNNNTSQSSNTNTKTFKATTFGNKTQNPSQDSVPTTNQTSHQVSDETKHQKKTNQTANKDVVLSNNQTALKVKDEIHMMESLMKCDFFYGKWIKDESYPLYEPGSCNLIDEQFNCINNGRPDKDYQKYKWQPKRCTLPRLDGKRMLDLLRGKRLVFVGDSINRNMWESLICILRNSVKDKSNVFEANGRSHFKGESSYSFVFKDYNFSVELFVSPFLVQEWETLVKNGTKKETLRLDLVGRSSNQYKDADIIIFNTGHWWTHDKTSKGKDYYQEGSHIYNELNVLEAFRKAITTWSRWVDANINTSKSMVFFRGYSSSHFSGGQWNSGGQCDSEVIPIKNEKYLRQYPPKMRVLEKVLRNMKTRVTYLNVTKMTDFRKDGHPSIYRKQNLSSDERKSPLMYQDCSHWCLPGVPDTWNAILYAELLIKQYQNQH* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4508 542 MobiDBLite consensus disorder prediction 93 152 - -
Tpr1g4508 542 MobiDBLite consensus disorder prediction 93 169 - -
Tpr1g4508 542 Pfam PMR5 N terminal Domain 193 244 IPR025846 -
Tpr1g4508 542 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 246 531 IPR026057 GO:0016740
Tpr1g4508 542 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 15 539 - -
Tpr1g4508 542 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 15 539 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g4508 Tpr-Chr1 53273820 53277473 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4508 - - cam:101512080 834.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g4508 1 53273820 53277473 Tpr1g4508 1 53273820 53277473 ECH
Tpr6g1623 6 17401340 17405202 Tpr1g4508 1 53273820 53277473 PCT