Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1428 ATGGATCATATTAGTAATGAAGCTAGTGTAGATCATTTTCCGATTGGTCCTTCAGACATTCTTGGTAAGACAATTGCTTTTAGGGTTCTATTCTGCAAATCAATGTCACATTTGAGGTATCAAATATTTCAATTGTTGTTAGGGTTCTTGTATAAGTTTAAAGGGGTGTTGAAATTGAAACCCTTTTTATCATGGTTTCATCCAAGAAACCCACAAGGGATATTAGCAATGATGACAATAGTTGCTATATTGTTGAAACGTTACACGAATGTGAAAGTTAGGGCTGAAATGGCATATAGGAGAAAATTTTGGAGAAATATGATGAGAAGTGCTTTGACTTATGATGAATGGGCTCATGGTGCTATGATGCTTGATAAATTGACACCAAAGATGAATGAATCGGATCTTTATGATGTTGAATTGGTGAGGAACAAACTTCAAGAGCTTCGTCACCGTCGACAAGAGGGATCTCTTAGAGATATTATGTTTTGTATGCGTGCTGATCTTGTTCGAAATTTAGGCAATATGTGTAACCCTGAACTACATAAGGGTAGGCTTCAAGTGCCTAAATTAATCAAGGAGTACCTTGATGAGGTATCAACACAGTTGAAGATGGTTTGCGATTCGGATTCTGAGGAGCTATCGTTGGAAGAAAAGCATGCTTTCATGCATGAAACTAGACATGCTTTTGGGAGAACAGCTTTGCTTTTAAGTGGTGGTGCTTCTCTTGGAGCTTTTCATGTTGGTGTAGTTAAAACACTGGTAAAACATAGACTCTTGCCTAGGATAGTTGCTGGTTCAAGCGTTGGATCCATTATGTGTGCTATTGTTGCCACTAGGCCATGGCGAGAACTTCAGAGTTTCTTCGAGGATTCGTTGCATTCATTGCAATTTTTCGATCAAATGGGTGGAATTTTCGCGGTTGTCAAGAGGGTCGCAATGCGCGGAGCTGTTCATGAGATCAGGCAGTTGCAAATGTTGTTGAGGCATTTAACAAATAATCTTACATTTCAAGAAGCTTATGATATGACAGGTAGAGTTCTTGGAATTACGGTTTGCTCCCCAAGGAAACATGAACCTCCTAGATGTCTTAACTACTTGACGTCACCTCACGTGGTTATATGGAGTGCTGTAACCGCTTCTTGTGCATTCCCTGGCCTTTTTGAAGCTCAAGAATTGATGGCAAAGAATAGAAGCGGAGATATTGTTCCTTACCATCCTCCTTTTAATCTAGGTCCTGAAGAAGGCTCCACACCGTCACGCCGGTGGAGGGACGGTAGCTTAGAGATTGATTTACCTATGATGCAGTTGAAAGAGCTATTCAATGTCAATCATTTCATCGTCAGTCAGGCCAACCCTCACATTGCACCATTGTTGAGATTGAAGGAGTTTGTAAGAACTTATGGAGGCAATTTTGCTGCCAAGCTTGCTCACCTTGTGGTGTTGGAGGTGAAACATAGGTGCAATCAAGTACTGGAACTTGGCTTTCCCTTAGGTGGACTTGCCAAACTGTTTGCTCAAGAATGGGAAGGTGATGTCACTATTGTTATGCCTGCTACCGTTGCTCAGTACTTAAAGATTATACAAAACCCTTCTTTAGGAGAGCTTCAAAAAGCAGCCAACCAAGGCAGAAGATGTAGCTGGGAGAAGCTTTCAGCCATAAAAGCAAATTGTGAAATTGAGCTTGCTCTTGACGAATCTGTAGCACATGTCAATAATATGAGAAGACTAAAACGAATTTCTGAGAGAACTGCTTCTGCCTCTCATGGTTTGTCAAGTACTGTCAGATTCAGCGCTTCAAGAAGAATTCCTTCTTGGAATTGCATGGCACGAGAGAATTCGGCAAGTTCTCTTGAAGACCTTACGGATGCTGCTTCTTCATTGCATCAAGCCATTGGCAGTGACTCTGAAAATGTTGAATCAATATCTTGGACAAGATCTGGTGGCCCTTTGATGAGAACCGCTTCAGCAAATATGTTCGTCGACTTTCTCCAAAACTTAGAGGTCGTTGATACCGAAATAAATAGAGGCGTGGTGGCGCATGCTAGCCCTCGTGATTTTCAGTATCATAGTTTCAGACACACAGGACCAAATAGGAACTCAGAATCTGAGCAGAAGGAAATCGACAACAGGGTTGCGAGTGGATCTAGCATTGTGATAAACGAAGGTGATCTTTTGCAGACGGAAAAGATTCATAACGGGATTGTGTTTAATGTTGTCAAGAAAGAAGCCTTAACACCTTCGGATAGGTGTCATGATTTTGGAAATTACAACAATGAAGTTGTTGAATGCGACCAAATTGACAGTCCAGGGAAGGAGATGGATACTGCTAGCTCCGATTCTGACAACGAAAATGCTGAATCCACACCTTCTTTGAGCTTGGATCAAAACACTGTTGATAGTAGTTAG 2409 0.413 MDHISNEASVDHFPIGPSDILGKTIAFRVLFCKSMSHLRYQIFQLLLGFLYKFKGVLKLKPFLSWFHPRNPQGILAMMTIVAILLKRYTNVKVRAEMAYRRKFWRNMMRSALTYDEWAHGAMMLDKLTPKMNESDLYDVELVRNKLQELRHRRQEGSLRDIMFCMRADLVRNLGNMCNPELHKGRLQVPKLIKEYLDEVSTQLKMVCDSDSEELSLEEKHAFMHETRHAFGRTALLLSGGASLGAFHVGVVKTLVKHRLLPRIVAGSSVGSIMCAIVATRPWRELQSFFEDSLHSLQFFDQMGGIFAVVKRVAMRGAVHEIRQLQMLLRHLTNNLTFQEAYDMTGRVLGITVCSPRKHEPPRCLNYLTSPHVVIWSAVTASCAFPGLFEAQELMAKNRSGDIVPYHPPFNLGPEEGSTPSRRWRDGSLEIDLPMMQLKELFNVNHFIVSQANPHIAPLLRLKEFVRTYGGNFAAKLAHLVVLEVKHRCNQVLELGFPLGGLAKLFAQEWEGDVTIVMPATVAQYLKIIQNPSLGELQKAANQGRRCSWEKLSAIKANCEIELALDESVAHVNNMRRLKRISERTASASHGLSSTVRFSASRRIPSWNCMARENSASSLEDLTDAASSLHQAIGSDSENVESISWTRSGGPLMRTASANMFVDFLQNLEVVDTEINRGVVAHASPRDFQYHSFRHTGPNRNSESEQKEIDNRVASGSSIVINEGDLLQTEKIHNGIVFNVVKKEALTPSDRCHDFGNYNNEVVECDQIDSPGKEMDTASSDSDNENAESTPSLSLDQNTVDSS* 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1428 802 CDD Pat_SDP1-like 165 572 - -
Tpr6g1428 802 Pfam Domain of unknown function (DUF3336) 97 228 IPR021771 GO:0004806|GO:0006629
Tpr6g1428 802 SUPERFAMILY FabD/lysophospholipase-like 231 568 IPR016035 -
Tpr6g1428 802 Gene3D Cytosolic phospholipase A2 catalytic domain 312 494 - -
Tpr6g1428 802 PANTHER TRIACYLGLYCEROL LIPASE-RELATED 1 631 - -
Tpr6g1428 802 MobiDBLite consensus disorder prediction 780 802 - -
Tpr6g1428 802 PANTHER NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER 1 631 - -
Tpr6g1428 802 MobiDBLite consensus disorder prediction 689 709 - -
Tpr6g1428 802 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 235 438 IPR002641 GO:0006629
Tpr6g1428 802 MobiDBLite consensus disorder prediction 765 802 - -
Tpr6g1428 802 Gene3D Cytosolic phospholipase A2 catalytic domain 231 311 - -
Tpr6g1428 802 Pfam Patatin-like phospholipase 235 427 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1428 Tpr-Chr6 15425380 15429656 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1428 4 778 Acyl Lipid Metabolism Gene Families AT5G04040 72.659 0.0 1178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1428 K14674 - gmx:100816093 1282.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1428 6 15425380 15429656 Tpr6g1428 6 15425380 15429656 ECH
Tpr6g1428 6 15425380 15429656 Tpr1g2408 1 27159143 27165218 PCT